The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR184
  5. cof-miR184b

Accession: B21532535

Entry

ID: cof-miR184b
Alias: F3064.M000112.A25
Sequence: UGGACGGAGAACUGAUAAGGGA
Description: microRNA mir-184 predicted
Species: 山茱萸  Species latin name: Cornus officinalis
TCM Name: Shanzhuyu(山茱萸)  
TCM Resource (Sample number): 山茱萸(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR184b; bca-miR184b; cmd-miR184b; cof-miR184b; gel-miR184b; ljc-miR184b; poe-miR184b; zof-miR184b;

Rfam Alignments

>> mir-184  microRNA mir-184
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0018   21.0   0.0  cm       53       73 ~.           1          21 + ~. 1.00    5' 0.52
                                                                 ??? ??????? ????????? NC
                                                           ~~~~~~>>>->>>>>>>->>>>>>>>> CS
                                                mir-184 12 <[41]*uGGACgGAgAACUGAUAAGGg 73
                                                                 UGGACGGAGAACUGAUAAGGG
                                            zof-miR184b  1 <[ 0]*UGGACGGAGAACUGAUAAGGG 21
                                                           ......********************* PP

Targets

Predicted by TargetFinder

NM_001363613 ;   NM_003799 ;   NM_007045 ;   NM_018050 ;   NM_194429 ;  

Predicted by TAPIR

NM_001145365 ;   NM_001363613 ;   NM_007045 ;   NM_014897 ;   NM_018050 ;   NM_018129 ;   NM_194429 ;