The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR9
  5. cmd-miR9i

Accession: B19196214

Entry

ID: cmd-miR9i
Alias: F28644.O000052.A11
Sequence: UCUUUGGUUAUCUAGCUGUAUGAA
Description: mir-9/mir-79 microRNA precursor family predicted,partially
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bswzz-miR9b; cba-miR9b; cmd-miR9i; cof-miR9g; sor-miR9f; tki-miR9i;

Rfam Alignments

>> mir-9  mir-9/mir-79 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00059   23.8   0.0  cm        2       25 ~~           1          24 + ~~ 1.00 5'&3' 0.33
                                ???????????????  ????        NC
                         ~~~~~::<<<<<<<<<<<<<<<--<<<<_~~~~~~ CS
                mir-9  1 <[1]*UCUUuGGUuaucUAGCUGUAUGAG*[37]> 62
                              UCUUUGGUUAUCUAGCUGUAUGA
            tki-miR9i  1 <[0]*UCUUUGGUUAUCUAGCUGUAUGAA*[ 0]> 24
                         .....************************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR