Accession: B18802828

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: cmd-miR30at
Alias: F3769.N000116.A11
Sequence: UGUAAACAUCCCCGGCUGGAAGC
Description: mir-30 microRNA precursor predicted,partially
Species: 香橼 Species latin name: Citrus medica
TCM Name: Foshou(佛手) Zhiqiao(枳壳) Zhishi(枳实) Xiangyuan(香橼)
TCM Resource (Sample number): 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR30ao; cit-miR30bv; cmd-miR30at; poe-miR30az; sor-miR30bs;

Rfam Alignments

>> mir-30  mir-30 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00038   25.0   0.0  cm        1       23 [~           1          23 + [~ 1.00    3' 0.57
                          ??????????  ??????????       NC
                         :<<<<<<<<<<--<<<<<<<<<<~~~~~~ CS
               mir-30  1 UGuAAACAUCcUcGACuGgaAGC*[37]> 60
                         UGUAAACAUCC+CG CUGGAAGC
          sor-miR30bs  1 UGUAAACAUCCCCGGCUGGAAGC*[ 0]> 23
                         ***********************...... PP

Targets

Predicted by TargetFinder

NM_001369201 ;

Predicted by TAPIR

NM_001369201 ;