The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. cmd-miR23v

Accession: B19477411

Entry

ID: cmd-miR23v
Alias: F104498.M000118.A25*
Sequence: AUCACAUUGCCAGGGAUUUCCA
Description: microRNA mir-23 predicted
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23o; asc-miR23i; bca-miR23o; bch-miR23m; cci-miR23g; cfe-miR23n; cit-miR23bo; cmd-miR23v; fsu-miR23; hcr-miR23u; poe-miR23av; pvl-miR23b; sch-miR23e; sdf-miR23d; sor-miR23bn; tch-miR23f; tki-miR23c; tmo-miR23; vph-miR23g; zof-miR23l;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   2.3e-05   25.8   0.0  cm       47       68 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                               ???      ?????????          NC
                                                         ~~~~~~>>>------>>>>>>>>>::::~~~~~ CS
                                               mir-23  1 <[46]*AUCACAUUGCCAGGGAuUuCCA*[7]> 75
                                                               AUCACAUUGCCAGGGAUUUCCA
                                           zof-miR23l  1 <[ 0]*AUCACAUUGCCAGGGAUUUCCA*[0]> 22
                                                         ......**********************..... PP

Targets

Predicted by TargetFinder

NM_001257197 ;   NM_001257198 ;   NM_003590 ;  

Predicted by TAPIR

NM_001098500 ;   NM_001104586 ;   NM_001257197 ;   NM_001257198 ;   NM_001282767 ;   NM_001282768 ;   NM_001282769 ;   NM_001282770 ;   NM_001282910 ;   NM_001282911 ;   NM_001282912 ;   NM_001321681 ;   NM_001322427 ;   NM_001322428 ;   NM_001322429 ;   NM_001352676 ;   NM_001352677 ;   NM_001352678 ;   NM_001352679 ;   NM_003590 ;   NM_019590 ;   NM_024744 ;   NR_136330 ;   NR_136331 ;   NR_148033 ;