The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR1
  5. cmd-miR1aj

Accession: B18406984

Entry

ID: cmd-miR1aj
Alias: F574.M000083.A11
Sequence: UGGAAUGUAAAGAAGUAUGUGC
Description: mir-1 microRNA precursor family predicted,partially
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cit-miR1aj; cmd-miR1aj; hcr-miR1ag; poe-miR1aj; sor-miR1aj;

Rfam Alignments

>> mir-1  mir-1 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0047   20.4   0.0  cm       49       69 ~.           1          21 + ~. 1.00    5' 0.33
                               ??? ????????????????? NC
                         ~~~~~~>>>->>>>>>>>>>>>>>>>> CS
                mir-1  9 <[40]*UGGAAUgUAAaGAAGuAUGua 69
                               UGGAAUGUAAAGAAGUAUGU
           sor-miR1aj  1 <[ 0]*UGGAAUGUAAAGAAGUAUGUG 21
                         ......********************* PP

Targets

Predicted by TargetFinder

NM_001143957 ;   NM_005562 ;   NM_030784 ;   NR_103535 ;  

Predicted by TAPIR

NM_005562 ;