Entry

ID: cmd-miR10ap
Alias: F10989.O000150.A11
Sequence: AACCCGUAGAUCCGAUCUUGUGAA
Description: mir-10 microRNA precursor family predicted,partially
Species: 香橼 Species latin name: Citrus medica
TCM Name: Foshou(佛手) Zhiqiao(枳壳) Zhishi(枳实) Xiangyuan(香橼)
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10aq; bca-miR10n; cci-miR10i; cfe-miR10an; cit-miR10bc; cmd-miR10ap; poe-miR10au; sor-miR10az; tch-miR10f; tki-miR10q;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !     0.002   19.3   0.0  cm        8       32 ~~           1          24 + ~~ 0.99 5'&3' 0.46
                                ???   ???????????????         NC
                         ~~~~~--<<<---<<<<<<<<<<<<<<<__~~~~~~ CS
               mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGuu*[43]> 75
                              +ACCC GUAGAUCCGA CUUGUG +
           tki-miR10q  1 <[0]*AACCC-GUAGAUCCGAUCUUGUGAA*[ 0]> 24
                         .....*****.*******************...... PP

Targets

Predicted by TargetFinder

Predicted by TAPIR

The Bencao (Herbal) Database（本草数据库）

Accession: B19017273