The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR194
  5. cmd-miR194a

Accession: B19099606

Entry

ID: cmd-miR194a
Alias: F17409.L000001.A25
Sequence: UGUAACAGCAACUCCAUGUGG
Description: mir-194 microRNA precursor family predicted,partially
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR194a; bca-miR194a; bhi-miR194a; cas-miR194a; cba-miR194; cfe-miR194a; cit-miR194a; cmd-miR194a; cmj-miR194; gel-miR194a; ljc-miR194a; llu-miR194; pcn-miR194; pgi-miR194a; poe-miR194a; ppr-miR194a; pvl-miR194a; sdi-miR194a; sgi-miR194a; sor-miR194a; tki-miR194a; zof-miR194a;

Rfam Alignments

>> mir-194  mir-194 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0049   19.2   0.0  cm       15       35 ~~           1          21 + ~~ 1.00 5'&3' 0.48
                                                                  ????????? ?????  ???       NC
                                                           ~~~~~~-<<<<<<<<<-<<<<<--<<<~~~~~~ CS
                                                mir-194  1 <[14]*UGUAACAGCAACuCCAUGUGG*[50]> 85
                                                                 UGUAACAGCAACUCCAUGUGG
                                            zof-miR194a  1 <[ 0]*UGUAACAGCAACUCCAUGUGG*[ 0]> 21
                                                           ......*********************...... PP

Targets

Predicted by TargetFinder

NM_001010986 ;   NM_001127392 ;   NM_001159629 ;   NM_001353810 ;   NM_001353811 ;   NM_001353812 ;   NM_001371457 ;   NM_002410 ;   NM_003128 ;   NM_003466 ;   NM_003645 ;   NM_012194 ;   NM_013279 ;   NM_013952 ;   NM_013953 ;   NM_013992 ;   NM_030773 ;   NM_173694 ;   NM_178313 ;   NR_135738 ;  

Predicted by TAPIR

NM_001010986 ;   NM_001127392 ;   NM_001353810 ;   NM_001353811 ;   NM_001353812 ;   NM_003128 ;   NM_003466 ;   NM_013279 ;   NM_013952 ;   NM_013953 ;   NM_013992 ;   NM_030773 ;   NM_173694 ;   NM_178313 ;   NR_135738 ;