The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR181
  5. cmd-miR181c

Accession: B19125112

Entry

ID: cmd-miR181c
Alias: F20206.N000030.A25
Sequence: AACAUUCAACGCUGUCGGUGAGU
Description: mir-181 microRNA precursor predicted,partially
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR181e; Bswzz-miR181b; acr-miR181b; asc-miR181a; bca-miR181c; bch-miR181c; bhi-miR181b; bpi-miR181c; cas-miR181; cba-miR181b; cci-miR181; ccs-miR181; cfe-miR181d; cit-miR181f; cma-miR181; cmd-miR181c; cof-miR181b; csp-miR181c; csu-miR181a; cya-miR181; ehu-miR181a; esn-miR181; fmu-miR181b; fsu-miR181c; gel-miR181; hcr-miR181d; lgr-miR181c; ljn-miR181; ljo-miR181c; ljp-miR181; llu-miR181b; mpu-miR181c; pfr-miR181c; poe-miR181e; ppr-miR181c; pvl-miR181d; sar-miR181a; sbc-miR181b; sch-miR181c; sdf-miR181; sdi-miR181a; sgi-miR181c; sor-miR181f; tch-miR181b; tki-miR181c; vph-miR181c; zof-miR181b;

Rfam Alignments

>> mir-181  mir-181 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00043   22.7   0.0  cm        9       31 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                                                              ?? ?????   ??????? ??       NC
                                                       ~~~~~--<<-<<<<<---<<<<<<<-<<~~~~~~ CS
                                            mir-181  1 <[8]*AACAUUCAACGCUGUCGgUGAGU*[45]> 76
                                                            AACAUUCAACGCUGUCGGUGAGU
                                        zof-miR181b  1 <[0]*AACAUUCAACGCUGUCGGUGAGU*[ 0]> 23
                                                       .....***********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR