The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. cmd-miR146u

Accession: B19715000

Entry

ID: cmd-miR146u
Alias: F313419.M000002.A11
Sequence: AGAGAACUGAAUUCCAUGGGUU
Description: microRNA mir-146 predicted
Species: 香橼  Species latin name: Citrus medica
TCM Name: Foshou(佛手)   Zhiqiao(枳壳)   Zhishi(枳实)   Xiangyuan(香橼)  
TCM Resource (Sample number): 佛手(1) 枳壳(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146y; cfe-miR146v; cmd-miR146u; poe-miR146p;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0018   20.8   0.0  cm       17       37 .~           2          22 + .~ 1.00    3' 0.43
                          ????????       ????        NC
                         -<<<<<<<<-------<<<<_~~~~~~ CS
              mir-146 17 GAGAACUGAAUUCCAUgGgcU*[38]> 75
                         GAGAACUGAAUUCCAUGGG U
          poe-miR146p  2 GAGAACUGAAUUCCAUGGGUU*[ 0]> 22
                         *********************...... PP

Targets

Predicted by TargetFinder

NM_030630 ;  

Predicted by TAPIR

NM_000690 ;   NM_001204889 ;   NM_024690 ;   NM_030630 ;   NR_051977 ;