The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR166
  5. Bjl-miR166i

Accession: B71860066

Entry

ID: Bjl-miR166i
Alias: F316.L000027.A11
Sequence: UCGGAUCAGGCUUCAUUCCCU
Description: mir-166 microRNA precursor predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR166i; cof-miR166ar; tch-miR166i;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00073   20.4   0.0  cm      101      120 ~.           1          20 + ~. 1.00    5' 0.55
                                ???  ??????  ??????? NC
                          ~~~~~~>>>-->>>>>>-->>>>>>> CS
              mir-166   7 <[94]*UCGGACCAGGCUUCAUUCCc 120
                                UCGGA CAGGCUUCAUUCCC
          tch-miR166i   1 <[ 0]*UCGGAUCAGGCUUCAUUCCC 20
                          ......******************** PP

Targets

Predicted by TargetFinder

NM_001077199 ;   NM_001202504 ;   NM_001270492 ;   NM_001318511 ;   NM_001323527 ;   NM_001323529 ;   NM_001323533 ;   NM_001323534 ;   NM_001323535 ;   NM_004715 ;   NM_048368 ;   NM_080657 ;   NM_139168 ;  

Predicted by TAPIR

NM_001198868 ;   NM_001198869 ;   NM_001202504 ;   NM_001318511 ;   NM_004715 ;   NM_005186 ;   NM_048368 ;   NR_040008 ;