The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR159
  5. Bjl-miR159g

Accession: B71847227

Entry

ID: Bjl-miR159g
Alias: F279.I000009.A11
Sequence: UGGAUUGAAGGGAGCUCU
Description: microRNA MIR159 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR159g; aan-miR159h; acr-miR159g; aha-miR159h; apl-miR159ar; ave-miR159i; bmj-miR159k; ccs-miR159am; cmo-miR159i; cpi-miR159h; csp-miR159ag; dst-miR159n; ehu-miR159h; gbi-miR159h; gma-miR159ak; gpe-miR159g; lfo-miR159h; lpu-miR159aq; mca-miR159al; nnu-miR159am; pav-miR159ao; pcl-miR159g; pcn-miR159h; poe-miR159f; por-miR159ap; psu-miR159ak; pvl-miR159aj; rch-miR159ai; rcr-miR159ap; rja-miR159ap; sbc-miR159i; smi-miR159al; sto-miR159ak; tci-miR159g; twi-miR159k; vum-miR159g;

Rfam Alignments

>> MIR159  microRNA MIR159
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0072   16.4   0.0  cm      166      183 ~~           1          18 + ~~ 1.00 5'&3' 0.50
                                 ???????  ????????        NC
                          ~~~~~~~>>>>>>>-->>>>>>>>:~~~~~~ CS
               MIR159   1 <[165]*UGGAcuGAAGGGAGCUCC*[13]> 196
                                 UGGA UGAAGGGAGCUC+
          vum-miR159g   1 <[  0]*UGGAUUGAAGGGAGCUCU*[ 0]> 18
                          .......******************...... PP

Targets

Predicted by TargetFinder

NM_000345 ;   NM_000506 ;   NM_000921 ;   NM_001024455 ;   NM_001025356 ;   NM_001042762 ;   NM_001077700 ;   NM_001077701 ;   NM_001077702 ;   NM_001077703 ;   NM_001077704 ;   NM_001080534 ;   NM_001109974 ;   NM_001128626 ;   NM_001128627 ;   NM_001134774 ;   NM_001134775 ;   NM_001134776 ;   NM_001135109 ;   NM_001142678 ;   NM_001142679 ;   NM_001143974 ;   NM_001146054 ;   NM_001146055 ;   NM_001146110 ;   NM_001146111 ;   NM_001146112 ;   NM_001146113 ;   NM_001166208 ;   NM_001166209 ;   NM_001171740 ;   NM_001171741 ;   NM_001172128 ;   NM_001177948 ;   NM_001177949 ;   NM_001195272 ;   NM_001204803 ;   NM_001204824 ;   NM_001206671 ;   NM_001206672 ;   NM_001218 ;   NM_001242412 ;   NM_001242729 ;   NM_001243540 ;   NM_001243541 ;   NM_001244580 ;   NM_001244683 ;   NM_001256213 ;   NM_001256214 ;   NM_001256850 ;   NM_001267550 ;   NM_001267556 ;   NM_001267558 ;   NM_001267559 ;   NM_001271634 ;   NM_001278683 ;   NM_001278685 ;   NM_001278688 ;   NM_001287492 ;   NM_001287493 ;   NM_001287494 ;   NM_001287495 ;   NM_001287496 ;   NM_001293642 ;   NM_001297563 ;   NM_001297564 ;   NM_001308203 ;   NM_001308220 ;   NM_001309426 ;   NM_001309427 ;   NM_001311257 ;   NM_001316350 ;   NM_001318734 ;   NM_001321920 ;   NM_001321922 ;   NM_001321923 ;   NM_001329919 ;   NM_001330221 ;   NM_001346558 ;   NM_001346559 ;   NM_001346560 ;   NM_001346561 ;   NM_001346562 ;   NM_001346563 ;   NM_001346564 ;   NM_001346565 ;   NM_001346690 ;   NM_001346691 ;   NM_001346692 ;   NM_001346693 ;   NM_001346694 ;   NM_001350217 ;   NM_001350218 ;   NM_001350530 ;   NM_001352684 ;   NM_001352685 ;   NM_001352686 ;   NM_001354208 ;   NM_001363943 ;   NM_001367580 ;   NM_001367581 ;   NM_001367582 ;   NM_001371476 ;   NM_003319 ;   NM_003496 ;   NM_004227 ;   NM_004513 ;   NM_004519 ;   NM_005185 ;   NM_005444 ;   NM_005736 ;   NM_007286 ;   NM_007308 ;   NM_012118 ;   NM_012152 ;   NM_013232 ;   NM_014236 ;   NM_014906 ;   NM_014979 ;   NM_015710 ;   NM_016201 ;   NM_016210 ;   NM_016337 ;   NM_017583 ;   NM_017742 ;   NM_019893 ;   NM_020148 ;   NM_020447 ;   NM_020731 ;   NM_020948 ;   NM_022116 ;   NM_022822 ;   NM_024557 ;   NM_024923 ;   NM_032291 ;   NM_033266 ;   NM_033400 ;   NM_133378 ;   NM_133432 ;   NM_133437 ;   NM_138694 ;   NM_145811 ;   NM_152296 ;   NM_152634 ;   NM_153694 ;   NM_170724 ;   NM_172217 ;   NM_177938 ;   NM_183387 ;   NM_201286 ;   NM_206925 ;   NR_003682 ;   NR_003713 ;   NR_024153 ;   NR_024503 ;   NR_024628 ;   NR_024629 ;   NR_024872 ;   NR_024873 ;   NR_027708 ;   NR_027709 ;   NR_048561 ;   NR_073390 ;   NR_104625 ;   NR_106898 ;   NR_109833 ;   NR_126534 ;   NR_134320 ;   NR_135511 ;   NR_135841 ;   NR_135842 ;   NR_135843 ;   NR_135844 ;   NR_135845 ;   NR_135846 ;   NR_135847 ;   NR_135848 ;   NR_135849 ;   NR_135850 ;   NR_135851 ;   NR_135852 ;   NR_135853 ;   NR_135854 ;   NR_144484 ;   NR_144497 ;   NR_146089 ;   NR_146604 ;   NR_148035 ;   NR_148920 ;   NR_161333 ;  

Predicted by TAPIR

NM_001024455 ;   NM_001025356 ;   NM_001039948 ;   NM_001042762 ;   NM_001077700 ;   NM_001077701 ;   NM_001077703 ;   NM_001077704 ;   NM_001079515 ;   NM_001080436 ;   NM_001080534 ;   NM_001098497 ;   NM_001098498 ;   NM_001103 ;   NM_001130072 ;   NM_001142550 ;   NM_001142551 ;   NM_001142678 ;   NM_001142679 ;   NM_001144994 ;   NM_001146110 ;   NM_001146111 ;   NM_001146112 ;   NM_001146113 ;   NM_001170629 ;   NM_001171740 ;   NM_001171741 ;   NM_001177948 ;   NM_001177949 ;   NM_001195272 ;   NM_001204803 ;   NM_001204824 ;   NM_001218 ;   NM_001242412 ;   NM_001243540 ;   NM_001243541 ;   NM_001244580 ;   NM_001244808 ;   NM_001244810 ;   NM_001244812 ;   NM_001244813 ;   NM_001244814 ;   NM_001244815 ;   NM_001244816 ;   NM_001256850 ;   NM_001267550 ;   NM_001267556 ;   NM_001267558 ;   NM_001267559 ;   NM_001271634 ;   NM_001272101 ;   NM_001278343 ;   NM_001278344 ;   NM_001278683 ;   NM_001278685 ;   NM_001287492 ;   NM_001287493 ;   NM_001287494 ;   NM_001287495 ;   NM_001287496 ;   NM_001287801 ;   NM_001291715 ;   NM_001291716 ;   NM_001291717 ;   NM_001291719 ;   NM_001293642 ;   NM_001297563 ;   NM_001297564 ;   NM_001300860 ;   NM_001308203 ;   NM_001316350 ;   NM_001318126 ;   NM_001318127 ;   NM_001321920 ;   NM_001321922 ;   NM_001321923 ;   NM_001329919 ;   NM_001330221 ;   NM_001346558 ;   NM_001346559 ;   NM_001346560 ;   NM_001346561 ;   NM_001346562 ;   NM_001346563 ;   NM_001346564 ;   NM_001346565 ;   NM_001349337 ;   NM_001349338 ;   NM_001349340 ;   NM_001349341 ;   NM_001349342 ;   NM_001349343 ;   NM_001349344 ;   NM_001350217 ;   NM_001350218 ;   NM_001350530 ;   NM_001354208 ;   NM_001363943 ;   NM_001370548 ;   NM_001371476 ;   NM_002429 ;   NM_002440 ;   NM_003193 ;   NM_003319 ;   NM_003496 ;   NM_004519 ;   NM_004998 ;   NM_005185 ;   NM_005444 ;   NM_005736 ;   NM_006115 ;   NM_012118 ;   NM_012152 ;   NM_013232 ;   NM_014236 ;   NM_014788 ;   NM_014829 ;   NM_014906 ;   NM_014969 ;   NM_014979 ;   NM_015603 ;   NM_015710 ;   NM_016201 ;   NM_016210 ;   NM_016337 ;   NM_017583 ;   NM_020447 ;   NM_020731 ;   NM_020920 ;   NM_020948 ;   NM_022052 ;   NM_022116 ;   NM_024923 ;   NM_032291 ;   NM_032682 ;   NM_033208 ;   NM_033400 ;   NM_054107 ;   NM_133378 ;   NM_133432 ;   NM_133437 ;   NM_133454 ;   NM_138694 ;   NM_139265 ;   NM_145811 ;   NM_152634 ;   NM_153029 ;   NM_153694 ;   NM_170724 ;   NM_176884 ;   NM_176885 ;   NM_177938 ;   NM_201286 ;   NM_206925 ;   NM_206953 ;   NM_206954 ;   NM_206955 ;   NM_206956 ;   NR_003682 ;   NR_003713 ;   NR_024153 ;   NR_024628 ;   NR_024629 ;   NR_027097 ;   NR_027708 ;   NR_027709 ;   NR_045680 ;   NR_047519 ;   NR_047521 ;   NR_047523 ;   NR_047524 ;   NR_047525 ;   NR_048561 ;   NR_073390 ;   NR_073606 ;   NR_105002 ;   NR_109833 ;   NR_110763 ;   NR_125341 ;   NR_134320 ;   NR_135511 ;   NR_135841 ;   NR_135842 ;   NR_135843 ;   NR_135844 ;   NR_135845 ;   NR_135846 ;   NR_135847 ;   NR_135848 ;   NR_135849 ;   NR_135850 ;   NR_135851 ;   NR_135852 ;   NR_135853 ;   NR_135854 ;   NR_146089 ;   NR_146142 ;   NR_146143 ;   NR_146604 ;   NR_148920 ;