The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. Bjl-miR146a

Accession: B72102105

Entry

ID: Bjl-miR146a
Alias: F7422.M000503.A25
Sequence: UGAGAACUGAACUCCAUGGGUU
Description: microRNA mir-146 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146a; bca-miR146a; cfe-miR146a;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0082   18.4   0.0  cm       16       37 ~~           1          22 + ~~ 1.00 5'&3' 0.45
                                                               ????????       ????        NC
                                                       ~~~~~~--<<<<<<<<-------<<<<_~~~~~~ CS
                                            mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcU*[53]> 90
                                                             UGAGAACUGAA UCCAUGGG U
                                        cfe-miR146a  1 <[ 0]*UGAGAACUGAACUCCAUGGGUU*[ 0]> 22
                                                       ......**********************...... PP

Targets

Predicted by TargetFinder

NM_001018037 ;   NM_001018038 ;   NM_001199144 ;   NM_015186 ;   NM_030630 ;   NM_033305 ;   NM_152381 ;  

Predicted by TAPIR

NM_001185039 ;   NM_001199144 ;   NM_004035 ;   NM_007292 ;   NM_030630 ;   NM_152381 ;