The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F1000
  5. B65101510

Accession: B65101510

Entry

ID: -
Alias: F1000.O000266.A25
Sequence: GCUGUGCGGGUUCAAGUCCCGCCC
Description: tmRNA transfer-messenger RNA
Species: 粉防己  Species latin name: Stephania tetrandra
TCM Names: Fangji(防己)  
TCM Resource (Sample number): 防己(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

B11934911; B44831248; B65101510;

Rfam Alignments

>> tmRNA  transfer-messenger RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.014   11.0   0.0  cm      327      343 ..           6          22 + .. 1.00    no 0.71
                                                                           NC
                                                         <<<<<_______>>>>> CS
                                               tmRNA 327 GgGGGUUCGAuUCCCcC 343
                                                         G:GGGUUC+A UCCC:C
                                   F1000.O000266.A25   6 GCGGGUUCAAGUCCCGC 22
                                                         ***************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR