The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F1000
  5. B53978553

Accession: B53978553

Entry

ID: -
Alias: F1000.R000333.A25
Sequence: CGUGCGGGUUCAAGUCCCGCCCCGGGC
Description: tmRNA transfer-messenger RNA
Species: 马齿苋  Species latin name: Portulaca oleracea
TCM Names: Machixian(马齿苋)  
TCM Resource (Sample number): 马齿苋(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

B47110876; B53978553;

Rfam Alignments

>> tmRNA  transfer-messenger RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.016   11.0   0.0  cm      327      343 ..           4          20 + .. 1.00    no 0.71
                                                                         NC
                                                       <<<<<_______>>>>> CS
                                             tmRNA 327 GgGGGUUCGAuUCCCcC 343
                                                       G:GGGUUC+A UCCC:C
                                 F1000.R000333.A25   4 GCGGGUUCAAGUCCCGC 20
                                                       ***************** PP

Targets

Predicted by TargetFinder


Predicted by TAPIR