The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F1000
  5. B13895684

Accession: B13895684

Entry

ID: -
Alias: F1000.R000345.A25
Sequence: CGGGUUCAAGUCCCGUCGAUCGCCCCA
Description: tmRNA transfer-messenger RNA
Species: 鸡冠花  Species latin name: Celosia cristata
TCM Names: Jiguanhua(鸡冠花)  
TCM Resource (Sample number): 鸡冠花(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> tmRNA  transfer-messenger RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.036    9.9   0.0  cm      328      354 ~]           1          17 + ~. 1.00    5' 0.65
                                                                            ?            NC
                                                      ~~~~~~~<<<<_______>>>>>]]]]]]]:::: CS
                                            tmRNA   1 <[327]*gGGGUUCGAuUCCCcCCAgCUCCACCa 354
                                                             :GGGUUC+A UCCC:
                                F1000.R000345.A25   1 <[  0]*CGGGUUCAAGUCCCGU----------C 17
                                                      .......****************..........* PP

Targets

Predicted by TargetFinder


Predicted by TAPIR