The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F100220
  5. B07210555

Accession: B07210555

Entry

ID: -
Alias: F100220.R000108.A11
Sequence: AUACCGCCCUAGUUCUGACCGUAAACU
Description: SSU_rRNA_eukarya Eukaryotic small subunit ribosomal RNA
Species: 益智  Species latin name: Alpinia oxyphylla
TCM Names: Yizhi(益智)  
TCM Resource (Sample number): 益智(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> SSU_rRNA_eukarya  Eukaryotic small subunit ribosomal RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.076   10.4   0.0  cm     1023     1049 ~~           1          27 + ~~ 1.00 5'&3' 0.48
                                       ????   ????????                NC
                           ~~~~~~~~____>>>>--->>>>>>>>,,,,,,,,~~~~~~~ CS
     SSU_rRNA_eukarya    1 <[1022]*AUACCguCGUAgucCuaaCcaUAAACg*[802]> 1851
                                   AUACCG C UAGU CU ACC+UAAAC+
  F100220.R000108.A11    1 <[   0]*AUACCGCCCUAGUUCUGACCGUAAACU*[  0]> 27
                           ........***************************....... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR