The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. sRNA Atlas
  4. F1000
  5. B06955411

Accession: B06955411

Entry

ID: -
Alias: F1000.O000267.A25
Sequence: GUUCAAGUCCCGUCGACUGCACCA
Description: tmRNA transfer-messenger RNA
Species: 益智  Species latin name: Alpinia oxyphylla
TCM Names: Yizhi(益智)  
TCM Resource (Sample number): 益智(1)
Evidence support:
Experimental status: Not yet
Database: sRNA Atlas

Homologs

miRBase Homologs

None

Bencao Homologs

B06955411; B22184079; B37618665;

Rfam Alignments

>> tmRNA  transfer-messenger RNA
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0019   13.9   0.0  cm      331      354 ~]           1          24 + ~] 1.00    5' 0.58
                                                                           ???????????     NC
                                                           ~~~~~~~<_______>>>>>]]]]]]]:::: CS
                                                 tmRNA   1 <[330]*GUUCGAuUCCCcCCAgCUCCACCa 354
                                                                  GUUC+A UCCC  C  CU CACCA
                                     F1000.O000267.A25   1 <[  0]*GUUCAAGUCCCGUCGACUGCACCA 24
                                                           .......************************ PP

Targets

Predicted by TargetFinder


Predicted by TAPIR