The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR24
  5. Bswzz-miR24c

Accession: B73072383

Entry

ID: Bswzz-miR24c
Alias: F2534.N001306.A25*
Sequence: UGGCUCAGUUCAGCAGGAACAGU
Description: mir-24 microRNA precursor family predicted,partially
Species: 生五朱子  Species latin name: -
TCM Name:
TCM Resource (Sample number): 生五朱子(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR24k; Bswzz-miR24c; acr-miR24d; asc-miR24h; bca-miR24g; bch-miR24i; bci-miR24; bhi-miR24d; bpi-miR24b; cas-miR24; cci-miR24e; cfe-miR24g; cit-miR24be; cmd-miR24m; cof-miR24e; csp-miR24e; epr-miR24b; esn-miR24e; fmu-miR24e; gel-miR24b; hcr-miR24o; ljp-miR24f; nnu-miR24b; nte-miR24b; pfr-miR24d; poe-miR24o; ppr-miR24d; sar-miR24c; sbc-miR24c; sch-miR24c; sdf-miR24d; sdi-miR24; sln-miR24; sor-miR24ay; tch-miR24c; tfa-miR24b; tki-miR24e; vph-miR24i; zof-miR24h;

Rfam Alignments

>> mir-24  mir-24 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   5.4e-05   24.2   0.0  cm       44       65 ~.           1          22 + ~. 1.00    5' 0.55
                                                                   ????????? ???    ? NC
                                                         ~~~~~~____>>>>>>>>>->>>----> CS
                                               mir-24  4 <[40]*UGGCUCAGuUCAGCAGGAACAG 65
                                                               UGGCUCAGUUCAGCAGGAACAG
                                           zof-miR24h  1 <[ 0]*UGGCUCAGUUCAGCAGGAACAG 22
                                                         ......********************** PP

Targets

Predicted by TargetFinder

NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NR_036109 ;   NR_148046 ;   NR_157588 ;  

Predicted by TAPIR

NM_001199563 ;   NM_001322117 ;   NM_001322118 ;   NM_001322119 ;   NM_007073 ;   NM_147147 ;   NR_036109 ;   NR_157588 ;