The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR396
  5. Bsr-miR396h

Accession: B72771876

Entry

ID: Bsr-miR396h
Alias: F22833.L000008.A29
Sequence: GCUCAAGAAAGCUGUGGGACA
Description: MIR396 putative
Species: 遂仁  Species latin name: -
TCM Name:
TCM Resource (Sample number): 蕤仁(1)
Predicted by Mirnovo: -
Evidence support: Mirbase
Experimental status: Not yet

Homologs

miRBase Homologs

fve-miR396b-3p;

Bencao Homologs

None

Rfam Alignments

>> MIR396  microRNA MIR396
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) ?     0.073   16.0   0.0  cm       89      107 ~.           1          19 + ~. 1.00    5' 0.53
                                ? ???? ?????? ???   NC
                          ~~~~~~>->>>>->>>>>>->>>-- CS
               MIR396  13 <[76]*GUUCAAgAAAGCcGUGGGA 107
                                G+UCAAGAAAGC GUGGGA
          Bsr-miR396h   1 <[ 0]*GCUCAAGAAAGCUGUGGGA 19
                          ......******************* PP

Targets

Predicted by TargetFinder

NM_001100588 ;   NM_001146282 ;   NM_001348181 ;   NM_001348182 ;   NM_001354478 ;   NM_001354479 ;   NM_001354482 ;   NM_003136 ;   NM_006277 ;   NM_019595 ;   NR_038276 ;   NR_120386 ;   NR_134265 ;   NR_160801 ;  

Predicted by TAPIR

NM_001037328 ;   NM_001128922 ;   NM_001172668 ;   NM_001172669 ;   NM_001172670 ;   NM_001174072 ;   NM_001321309 ;   NM_001370187 ;   NM_001370188 ;   NM_001370189 ;   NM_001370190 ;   NM_005512 ;   NM_012109 ;   NM_024706 ;   NM_053025 ;   NM_053026 ;   NM_053027 ;   NM_053028 ;   NM_053031 ;   NM_053032 ;   NR_038276 ;   NR_038879 ;   NR_047001 ;   NR_120386 ;   NR_134265 ;   NR_160801 ;   NR_163259 ;