The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. Bjl-miR146x

Accession: B72252580

Entry

ID: Bjl-miR146x
Alias: F174259.L000057.A11
Sequence: UGAGAACUGAAUUCCAUGGGG
Description: microRNA mir-146 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146x; cfe-miR146u; cmd-miR146t; sor-miR146s;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0022   20.3   0.0  cm       16       36 ~~           1          21 + ~~ 1.00 5'&3' 0.48
                                 ????????       ????       NC
                         ~~~~~~--<<<<<<<<-------<<<<~~~~~~ CS
              mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgc*[54]> 90
                               UGAGAACUGAAUUCCAUGGG
          sor-miR146s  1 <[ 0]*UGAGAACUGAAUUCCAUGGGG*[ 0]> 21
                         ......*********************...... PP

Targets

Predicted by TargetFinder

NM_001290223 ;   NM_001330242 ;   NM_001330243 ;   NM_001380 ;   NM_013302 ;   NM_024560 ;   NM_207363 ;  

Predicted by TAPIR

NM_001290223 ;   NM_001380 ;   NM_003309 ;   NM_004391 ;   NM_207363 ;