The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. Bjl-miR146w

Accession: B72249508

Entry

ID: Bjl-miR146w
Alias: F156164.O000005.A25
Sequence: UGAGAACUGAAUUCCAUGGGUUAU
Description: microRNA mir-146 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146w; cmd-miR146s; esn-miR146c; poe-miR146o; tki-miR146j;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00079   22.2   0.0  cm       16       39 ~~           1          24 + ~~ 0.99 5'&3' 0.38
                                                                ????????       ????          NC
                                                        ~~~~~~--<<<<<<<<-------<<<<___~~~~~~ CS
                                             mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcUGU*[51]> 90
                                                              UGAGAACUGAAUUCCAUGGG U U
                                         tki-miR146j  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUUAU*[ 0]> 24
                                                        ......***********************9...... PP

Targets

Predicted by TargetFinder

NM_001198950 ;   NM_015011 ;  

Predicted by TAPIR