The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR7
  5. Bjl-miR7j

Accession: B72233978

Entry

ID: Bjl-miR7j
Alias: F98069.N000069.A25
Sequence: UGGAAGACUAGUGAUUUUGUUGU
Description: mir-7 microRNA precursor predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7j; bca-miR7e; bhi-miR7d; cas-miR7b; cfe-miR7f; cmd-miR7h; cof-miR7d; csp-miR7c; csu-miR7e; fsu-miR7c; gel-miR7e; hcr-miR7d; ljc-miR7e; lji-miR7c; ljn-miR7c; ljo-miR7c; llu-miR7d; mpu-miR7c; poe-miR7f; ppr-miR7e; pvl-miR7c; sar-miR7c; sba-miR7d; sch-miR7b; sgi-miR7e; sor-miR7e; tki-miR7i; zof-miR7e;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0004   24.1   0.0  cm       15       37 ~~           1          23 + ~~ 1.00 5'&3' 0.35
                                                                ??       ????? ???????       NC
                                                         ~~~~~~-<<-------<<<<<-<<<<<<<~~~~~~ CS
                                                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGU*[51]> 88
                                                               UGGAAGACUAGUGAUUUUGUUGU
                                            zof-miR7e  1 <[ 0]*UGGAAGACUAGUGAUUUUGUUGU*[ 0]> 23
                                                         ......***********************...... PP

Targets

Predicted by TargetFinder

NM_001005353 ;   NM_001048166 ;   NM_001282936 ;   NM_001282937 ;   NM_001282938 ;   NM_001282939 ;   NM_001330616 ;   NM_003035 ;   NM_013410 ;   NM_203464 ;   NR_039867 ;  

Predicted by TAPIR

NM_001005353 ;   NM_001048166 ;   NM_001282936 ;   NM_001282937 ;   NM_001282938 ;   NM_001282939 ;   NM_001330616 ;   NM_003035 ;   NM_013410 ;   NM_203464 ;   NR_039867 ;