The Bencao (Herbal) Database(本草数据库)
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miRNA_Target(miRNA靶基因)
sRNA_Target(sRNA靶基因)
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TranscriptomeAtlas
miRNA Atlas
lin
Bjl-lin-4g
Accession:
B72200094
Entry
Homologs
Rfam Alignments
Targets
Entry
ID:
Bjl-lin-4g
Alias:
F44011.M000049.A25*
Sequence:
UCCCUGAGACCCUAACUUGUGA
Description:
lin-4 microRNA precursor predicted,partially
Species:
焦榔
  Species latin name:
-
TCM Name:
TCM Resource (Sample number):
焦榔(1)
Predicted by
Mirnovo
:
-
Evidence support:
Infernal
Experimental status:
Not yet
Homologs
miRBase Homologs
None
Bencao Homologs
Bjl-lin-4g
;
Bswzz-lin-4d
;
aar-lin-4b
;
acr-lin-4d
;
apa-lin-4
;
asc-lin-4e
;
bca-lin-4d
;
bch-lin-4e
;
bhi-lin-4b
;
bpi-lin-4d
;
cas-lin-4b
;
cba-lin-4b
;
cci-lin-4e
;
cfe-lin-4g
;
cit-lin-4t
;
cmd-lin-4j
;
cmj-lin-4
;
cmo-lin-4
;
cof-lin-4f
;
csp-lin-4e
;
csu-lin-4b
;
cya-lin-4
;
eja-lin-4
;
epr-lin-4b
;
esn-lin-4c
;
fmu-lin-4d
;
fsu-lin-4h
;
gel-lin-4c
;
hcr-lin-4i
;
lba-lin-4c
;
lch-lin-4
;
lgr-lin-4
;
ljn-lin-4b
;
ljo-lin-4e
;
ljp-lin-4e
;
llu-lin-4c
;
mal-lin-4b
;
nnu-lin-4b
;
nte-lin-4
;
pfr-lin-4d
;
poe-lin-4n
;
ppr-lin-4c
;
pvl-lin-4h
;
rcr-lin-4b
;
sar-lin-4d
;
sba-lin-4b
;
sbc-lin-4
;
sch-lin-4c
;
sdf-lin-4f
;
sgi-lin-4d
;
sln-lin-4b
;
sor-lin-4u
;
sto-lin-4
;
tch-lin-4e
;
tfa-lin-4c
;
tki-lin-4g
;
tmo-lin-4
;
vph-lin-4d
;
zof-lin-4f
;
Rfam Alignments
>> lin-4  lin-4 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0012   21.3   0.0  cm        7       28 ~~           1          22 + ~~ 1.00 5'&3' 0.50
                                                                 ??? ???? ??? ????????       NC
                                                           ~~~~~-<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
                                                  lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGA*[43]> 71
                                                                UCCCUGAGACCC AACUUGUGA
                                             zof-lin-4f  1 <[0]*UCCCUGAGACCCUAACUUGUGA*[ 0]> 22
                                                           .....**********************...... PP
Targets
Predicted by TargetFinder
NM_001005851
;  
NM_001257135
;  
NM_002309
;  
Predicted by TAPIR
NM_001005851
;  
NR_033962
;  
NR_108100
;