The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR10
  5. Bjl-miR10av

Accession: B72204974

Entry

ID: Bjl-miR10av
Alias: F49558.O000061.A25
Sequence: AACCCGUAGAUCCGAACUUGUGUU
Description: mir-10 microRNA precursor family predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bbj-miR10; Bjl-miR10av; Bsr-miR10; Bswzz-miR10g; abs-miR10c; acs-miR10; act-miR10f; ada-miR10; aeu-miR10c; aha-miR10; aox-miR10c; apl-miR10; bca-miR10s; bci-miR10c; bmj-miR10; ccm-miR10; ccs-miR10; cfe-miR10at; cja-miR10; cmd-miR10au; cmj-miR10c; cof-miR10k; cor-miR10c; cpn-miR10; csp-miR10l; dsu-miR10b; efo-miR10; eja-miR10e; est-miR10; fmu-miR10k; fth-miR10c; gmc-miR10c; iba-miR10; ija-miR10; ini-miR10; lch-miR10d; ljc-miR10f; lji-miR10c; llu-miR10j; lsi-miR10; mco-miR10; nja-miR10d; nsc-miR10c; pas-miR10b; pav-miR10b; pch-miR10d; pci-miR10b; pcl-miR10b; pcn-miR10; pgi-miR10c; poe-miR10be; rcd-miR10c; rte-miR10d; run-miR10g; sad-miR10d; sar-miR10g; sdf-miR10l; ssa-miR10c; sse-miR10; tja-miR10; twi-miR10b; vtr-miR10b;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00048   21.2   0.0  cm        8       32 ~~           1          24 + ~~ 1.00 5'&3' 0.46
                                                                ???   ???????????????         NC
                                                         ~~~~~--<<<---<<<<<<<<<<<<<<<__~~~~~~ CS
                                               mir-10  1 <[7]*UACCCUGUAGAucCGAacuUGUGuu*[43]> 75
                                                              +ACCC GUAGAUCCGAACUUGUGUU
                                           vtr-miR10b  1 <[0]*AACCC-GUAGAUCCGAACUUGUGUU*[ 0]> 24
                                                         .....*****.*******************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR