The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR9
  5. Bjl-miR9f

Accession: B72175620

Entry

ID: Bjl-miR9f
Alias: F28644.N000035.A25
Sequence: UCUUUGGUUAUCUAGCUGUAUGG
Description: mir-9/mir-79 microRNA precursor family predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR9f; acr-miR9c; cfe-miR9e; cit-miR9f; cof-miR9d; csu-miR9e; ljc-miR9c; rcr-miR9d; sor-miR9d; tki-miR9g;

Rfam Alignments

>> mir-9  mir-9/mir-79 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0013   22.4   0.0  cm        2       24 ~~           1          23 + ~~ 1.00 5'&3' 0.39
                                                        ???????????????  ????       NC
                                                 ~~~~~::<<<<<<<<<<<<<<<--<<<<~~~~~~ CS
                                        mir-9  1 <[1]*UCUUuGGUuaucUAGCUGUAUGA*[38]> 62
                                                      UCUUUGGUUAUCUAGCUGUAUG
                                    tki-miR9g  1 <[0]*UCUUUGGUUAUCUAGCUGUAUGG*[ 0]> 23
                                                 .....***********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR