The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR23
  5. Bjl-miR23b

Accession: B72156124

Entry

ID: Bjl-miR23b
Alias: F19267.L000009.A25
Sequence: AUCACAUUGCCAGGGAUUUCC
Description: microRNA mir-23 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR23b; Bswzz-miR23b; acr-miR23b; asc-miR23b; bca-miR23b; bch-miR23c; bpi-miR23b; cfe-miR23b; cit-miR23ab; cmd-miR23c; csp-miR23a; fmu-miR23a; gel-miR23a; hcr-miR23c; poe-miR23ab; ppr-miR23b; sgi-miR23a; sor-miR23ad; zof-miR23b;

Rfam Alignments

>> mir-23  microRNA mir-23
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   7.7e-05   24.0   0.0  cm       47       67 ~~           1          21 + ~~ 1.00 5'&3' 0.48
                                                             ???      ?????????         NC
                                                       ~~~~~~>>>------>>>>>>>>>:::~~~~~ CS
                                             mir-23  1 <[46]*AUCACAUUGCCAGGGAuUuCC*[8]> 75
                                                             AUCACAUUGCCAGGGAUUUCC
                                         zof-miR23b  1 <[ 0]*AUCACAUUGCCAGGGAUUUCC*[0]> 21
                                                       ......*********************..... PP

Targets

Predicted by TargetFinder

NM_001134382 ;   NM_001257197 ;   NM_001257198 ;   NM_001330619 ;   NM_003590 ;   NM_005569 ;   NM_006734 ;   NM_014869 ;   NM_016733 ;  

Predicted by TAPIR

NM_001098500 ;   NM_001104586 ;   NM_001257197 ;   NM_001257198 ;   NM_001282767 ;   NM_001282768 ;   NM_001282769 ;   NM_001282770 ;   NM_001282910 ;   NM_001282911 ;   NM_001282912 ;   NM_001286164 ;   NM_001321681 ;   NM_001322427 ;   NM_001322428 ;   NM_001322429 ;   NM_001352676 ;   NM_001352677 ;   NM_001352678 ;   NM_001352679 ;   NM_001364856 ;   NM_003590 ;   NM_004319 ;   NM_005569 ;   NM_016733 ;   NM_019590 ;   NM_024744 ;   NM_207108 ;   NR_104631 ;   NR_136330 ;   NR_136331 ;   NR_148033 ;