The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR27
  5. Bjl-miR27p

Accession: B72143683

Entry

ID: Bjl-miR27p
Alias: F15151.M000110.A11
Sequence: UUCACAGUGGCUAAGUUCUGCC
Description: microRNA mir-27 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR27p; asc-miR27l; bca-miR27o; cit-miR27bv; cmd-miR27az; poe-miR27bb; sor-miR27bu; zof-miR27m;

Rfam Alignments

>> mir-27  microRNA mir-27
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00063   21.7   0.0  cm       56       76 ~.           1          21 + ~. 1.00    5' 0.48
                              ?????  ???????????    NC
                        ~~~~~~>>>>>-->>>>>>>>>>>::: CS
              mir-27 15 <[41]*uUCACAGuGGCUAAGuuCuGC 76
                              UUCACAGUGGCUAAGUUCUGC
          zof-miR27m  1 <[ 0]*UUCACAGUGGCUAAGUUCUGC 21
                        ......********************* PP

Targets

Predicted by TargetFinder

NR_104664 ;   NR_164112 ;  

Predicted by TAPIR

NM_001128431 ;   NM_001351655 ;   NM_001351656 ;   NM_001351657 ;   NM_001351658 ;   NM_001351659 ;   NM_001351660 ;   NM_002010 ;   NM_015359 ;   NM_017545 ;   NM_021916 ;   NR_164112 ;