The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR92
  5. Bjl-miR92b

Accession: B72116172

Entry

ID: Bjl-miR92b
Alias: F9254.K000131.A11
Sequence: UUGCACUUGUCCCGGCCUGU
Description: mir-92 microRNA precursor family predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR92b; esn-miR92a;

Rfam Alignments

>> mir-92  mir-92 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0054   17.1   0.0  cm       52       71 ~~           1          20 + ~~ 1.00 5'&3' 0.60
                   ??????? ????? ??????      NC
             ~~~~~~>>>>>>>->>>>>->>>>>>~~~~~ CS
   mir-92  1 <[51]*uUGCACuUgUCCCGGCCugu*[9]> 80
                   UUGCACUUGUCCCGGCCUGU
esn-miR92a  1 <[ 0]*UUGCACUUGUCCCGGCCUGU*[0]> 20
             ......********************..... PP

Targets

Predicted by TargetFinder

NM_001007271 ;   NM_001007272 ;   NM_001007273 ;   NM_001111077 ;   NM_001199577 ;   NM_001199839 ;   NM_001199864 ;   NM_001320842 ;   NM_001320843 ;   NM_001363514 ;   NM_001366501 ;   NM_003247 ;   NM_003373 ;   NM_003379 ;   NM_004050 ;   NM_014000 ;   NM_014983 ;   NM_015235 ;   NM_015629 ;   NM_016364 ;   NM_018989 ;   NM_130759 ;   NM_173829 ;  

Predicted by TAPIR

NM_001007271 ;   NM_001007272 ;   NM_001007273 ;   NM_001199864 ;   NM_001320842 ;   NM_001331010 ;   NM_001363514 ;   NM_003247 ;   NM_003379 ;   NM_006439 ;   NM_016364 ;   NM_016639 ;   NM_018989 ;