The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. Bjl-miR146c

Accession: B72116090

Entry

ID: Bjl-miR146c
Alias: F9241.L000010.A11
Sequence: UGAGAACUGAAUUCCAUGGGC
Description: microRNA mir-146 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146c; cfe-miR146c; cit-miR146b; cmd-miR146b; poe-miR146b;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00096   21.6   0.0  cm       16       36 ~~           1          21 + ~~ 1.00 5'&3' 0.48
                                 ????????       ????       NC
                         ~~~~~~--<<<<<<<<-------<<<<~~~~~~ CS
              mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgc*[54]> 90
                               UGAGAACUGAAUUCCAUGGGC
          poe-miR146b  1 <[ 0]*UGAGAACUGAAUUCCAUGGGC*[ 0]> 21
                         ......*********************...... PP

Targets

Predicted by TargetFinder

NM_001318124 ;   NM_001318125 ;   NM_032167 ;   NM_032562 ;   NM_207363 ;   NR_038216 ;   NR_038217 ;   NR_038218 ;   NR_038219 ;  

Predicted by TAPIR

NM_000690 ;   NM_001204889 ;   NM_032167 ;   NM_207363 ;