The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR146
  5. Bjl-miR146f

Accession: B72116099

Entry

ID: Bjl-miR146f
Alias: F9241.M000023.A25
Sequence: UGAGAACUGAAUUCCAUGGGUA
Description: microRNA mir-146 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR146f; cfe-miR146f; cit-miR146e; cmd-miR146e; poe-miR146d; ppr-miR146c; sor-miR146c;

Rfam Alignments

>> mir-146  microRNA mir-146
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0017   20.8   0.0  cm       16       37 ~~           1          22 + ~~ 1.00 5'&3' 0.41
                                                                ????????       ????        NC
                                                        ~~~~~~--<<<<<<<<-------<<<<_~~~~~~ CS
                                             mir-146  1 <[15]*UGAGAACUGAAUUCCAUgGgcU*[53]> 90
                                                              UGAGAACUGAAUUCCAUGGG
                                         sor-miR146c  1 <[ 0]*UGAGAACUGAAUUCCAUGGGUA*[ 0]> 22
                                                        ......**********************...... PP

Targets

Predicted by TargetFinder

NM_001198950 ;   NM_015011 ;  

Predicted by TAPIR

NM_001358312 ;   NM_024690 ;