The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR9
  5. Bjl-miR9d

Accession: B72075026

Entry

ID: Bjl-miR9d
Alias: F4652.M000019.A11*
Sequence: AUAAAGCUAGAUAACCGAAAGU
Description: mir-9/mir-79 microRNA precursor family predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR9d; cfe-miR9c; cit-miR9d; cmd-miR9c; fsu-miR9c; lba-miR9d; pfr-miR9c; pvl-miR9d; tki-miR9d;

Rfam Alignments

>> mir-9  mir-9/mir-79 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00039   24.3   0.0  cm       41       62 ~]           1          22 + ~] 1.00    5' 0.32
                  ??  ???????????????    NC
            ~~~~~~>>-->>>>>>>>>>>>>>>::: CS
   mir-9  1 <[40]*AUAAAGCUAgauaACCgAAggU 62
                  AUAAAGCUAGAUAACCGAA+GU
tki-miR9d  1 <[ 0]*AUAAAGCUAGAUAACCGAAAGU 22
            ......********************** PP

Targets

Predicted by TargetFinder

NM_001098500 ;   NM_001135599 ;   NM_001282767 ;   NM_001282768 ;   NM_001282769 ;   NM_001282770 ;   NM_001321681 ;   NM_003238 ;   NM_019590 ;   NR_024383 ;   NR_024384 ;   NR_029691 ;   NR_030741 ;   NR_125715 ;   NR_138148 ;   NR_138149 ;   NR_152232 ;   NR_152233 ;   NR_152234 ;   NR_152236 ;   NR_152237 ;   NR_152240 ;   NR_152241 ;  

Predicted by TAPIR