The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. lin
  5. Bjl-lin-4d

Accession: B72048704

Entry

ID: Bjl-lin-4d
Alias: F3081.N000032.A25
Sequence: UCCCUGAGACCCUAACUUGUGAA
Description: lin-4 microRNA precursor predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-lin-4d; Bswzz-lin-4c; acr-lin-4c; asc-lin-4d; bca-lin-4c; bch-lin-4d; bpi-lin-4c; cci-lin-4d; cfe-lin-4e; cit-lin-4f; cmd-lin-4f; fsu-lin-4e; gel-lin-4b; hcr-lin-4e; ljo-lin-4d; ljp-lin-4d; llu-lin-4b; pfr-lin-4c; poe-lin-4g; ppr-lin-4b; pvl-lin-4e; sar-lin-4c; sch-lin-4b; sdf-lin-4d; sln-lin-4a; sor-lin-4f; tch-lin-4c; tfa-lin-4b; tki-lin-4d; zof-lin-4d;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0017   20.8   0.0  cm        7       29 ~~           1          23 + ~~ 1.00 5'&3' 0.48
                                                             ??? ???? ??? ????????        NC
                                                       ~~~~~-<<<-<<<<-<<<-<<<<<<<<_~~~~~~ CS
                                              lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGAg*[42]> 71
                                                            UCCCUGAGACCC AACUUGUGA
                                         zof-lin-4d  1 <[0]*UCCCUGAGACCCUAACUUGUGAA*[ 0]> 23
                                                       .....***********************...... PP

Targets

Predicted by TargetFinder

NM_001005851 ;  

Predicted by TAPIR

NR_033962 ;   NR_108100 ;