Entry

ID: Bjl-miR10ab
Alias: F2563.L000001.A25*
Sequence: ACCCUGUAGAUCCGAAUUUGU
Description: mir-10 microRNA precursor family predicted,partially
Species: 焦榔 Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR10ab; bca-miR10b; bch-miR10b; cba-miR10b; cfe-miR10ab; cit-miR10ab; cmd-miR10ab; csp-miR10b; esn-miR10b; gel-miR10b; hcr-miR10b; ljn-miR10b; llu-miR10a; poe-miR10ab; ppr-miR10b; pvl-miR10b; sgi-miR10b; sor-miR10ab; tki-miR10b; tmo-miR10b; vph-miR10b;

Rfam Alignments

>> mir-10  mir-10 microRNA precursor family
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00071   20.5   0.0  cm        9       29 ~~           1          21 + ~~ 1.00 5'&3' 0.43
                                                           ???   ??????????????       NC
                                                     ~~~~~-<<<---<<<<<<<<<<<<<<~~~~~~ CS
                                           mir-10  1 <[8]*ACCCUGUAGAucCGAacuUGU*[46]> 75
                                                          ACCCUGUAGAUCCGAA UUGU
                                       vph-miR10b  1 <[0]*ACCCUGUAGAUCCGAAUUUGU*[ 0]> 21
                                                     .....*********************...... PP

Targets

Predicted by TargetFinder

NM_001172689 ; NM_001172690 ; NM_001172691 ; NM_001172692 ; NM_015172 ; NM_152360 ;

Predicted by TAPIR