The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR26
  5. Bjl-miR26aa

Accession: B72028208

Entry

ID: Bjl-miR26aa
Alias: F2227.M000035.A25
Sequence: UUCAAGUAAUCCAGGAUAGGCC
Description: mir-26 microRNA precursor family predicted,partially
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR26aa; Bswzz-miR26a; acr-miR26a; asc-miR26a; bca-miR26aa; bhi-miR26a; car-miR26a; cas-miR26a; cba-miR26a; cci-miR26a; cfe-miR26a; cit-miR26ab; cmd-miR26aa; cmj-miR26a; cof-miR26a; cri-miR26a; csp-miR26a; csu-miR26a; cya-miR26a; ehu-miR26a; epr-miR26a; esn-miR26a; fmu-miR26a; gel-miR26a; hcr-miR26aa; hof-miR26a; kga-miR26a; lba-miR26a; lch-miR26a; ljc-miR26a; lji-miR26a; ljp-miR26a; llu-miR26a; mal-miR26a; nnu-miR26a; nte-miR26a; pfr-miR26a; poe-miR26aa; ppr-miR26a; psu-miR26a; sch-miR26a; sdf-miR26a; sdi-miR26a; sgi-miR26a; sln-miR26a; sor-miR26aa; ssu-miR26a; tch-miR26a; tfa-miR26a; tki-miR26a; zof-miR26a;

Rfam Alignments

>> mir-26  mir-26 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0041   18.3   0.0  cm        9       30 ~~           1          22 + ~~ 0.99 5'&3' 0.45
                                                             ????????? ?????????        NC
                                                      ~~~~~::<<<<<<<<<-<<<<<<<<<_~~~~~~ CS
                                            mir-26  1 <[8]*UUCAAGUAAucCAGgAuAGGCU*[44]> 74
                                                           UUCAAGUAAUCCAGGAUAGGC
                                        zof-miR26a  1 <[0]*UUCAAGUAAUCCAGGAUAGGCC*[ 0]> 22
                                                      .....*********************9...... PP

Targets

Predicted by TargetFinder

NM_178313 ;  

Predicted by TAPIR

NM_001034915 ;   NM_001122825 ;   NM_001122826 ;   NM_001122827 ;   NM_017697 ;