The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR159
  5. Bjl-miR159h

Accession: B71987284

Entry

ID: Bjl-miR159h
Alias: F1317.I000004.A11
Sequence: UUGGAUUGAAGGGAGCUC
Description: microRNA MIR159 predicted
Species: 焦榔  Species latin name: -
TCM Name:
TCM Resource (Sample number): 焦榔(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR159h; apl-miR159aw; ave-miR159j; bmj-miR159m; cco-miR159az; cof-miR159i; cso-miR159f; gma-miR159ap; lpu-miR159bc; mca-miR159ao; nnu-miR159as; por-miR159au; psu-miR159am; pvl-miR159ak; rch-miR159ak; rcr-miR159at; smi-miR159ao; sto-miR159am; vof-miR159g;

Rfam Alignments

>> MIR159  microRNA MIR159
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0031   17.9   0.0  cm      165      182 ~~           1          18 + ~~ 1.00 5'&3' 0.50
                                  ???????  ????????       NC
                          ~~~~~~~->>>>>>>-->>>>>>>>~~~~~~ CS
               MIR159   1 <[164]*UUGGAcuGAAGGGAGCUC*[14]> 196
                                 UUGGA UGAAGGGAGCUC
          vof-miR159g   1 <[  0]*UUGGAUUGAAGGGAGCUC*[ 0]> 18
                          .......******************...... PP

Targets

Predicted by TargetFinder

NM_000476 ;   NM_000506 ;   NM_001001659 ;   NM_001010915 ;   NM_001024455 ;   NM_001025356 ;   NM_001031684 ;   NM_001042762 ;   NM_001047160 ;   NM_001079516 ;   NM_001080410 ;   NM_001080534 ;   NM_001142678 ;   NM_001142679 ;   NM_001143974 ;   NM_001167671 ;   NM_001167672 ;   NM_001170331 ;   NM_001171740 ;   NM_001171741 ;   NM_001177948 ;   NM_001177949 ;   NM_001184773 ;   NM_001184774 ;   NM_001184775 ;   NM_001184776 ;   NM_001184777 ;   NM_001195272 ;   NM_001195446 ;   NM_001198595 ;   NM_001204803 ;   NM_001242412 ;   NM_001244580 ;   NM_001256850 ;   NM_001267550 ;   NM_001267556 ;   NM_001267558 ;   NM_001267559 ;   NM_001267798 ;   NM_001271634 ;   NM_001278683 ;   NM_001278685 ;   NM_001282168 ;   NM_001282169 ;   NM_001284206 ;   NM_001284207 ;   NM_001287492 ;   NM_001287493 ;   NM_001287494 ;   NM_001287495 ;   NM_001287496 ;   NM_001288824 ;   NM_001288825 ;   NM_001288826 ;   NM_001288827 ;   NM_001288828 ;   NM_001300860 ;   NM_001311257 ;   NM_001318121 ;   NM_001318122 ;   NM_001321265 ;   NM_001321266 ;   NM_001321267 ;   NM_001321883 ;   NM_001321903 ;   NM_001321920 ;   NM_001321922 ;   NM_001321923 ;   NM_001321957 ;   NM_001321958 ;   NM_001321959 ;   NM_001321960 ;   NM_001329919 ;   NM_001346558 ;   NM_001346559 ;   NM_001346560 ;   NM_001346561 ;   NM_001346562 ;   NM_001346563 ;   NM_001346564 ;   NM_001346565 ;   NM_001363802 ;   NM_001363943 ;   NM_001367580 ;   NM_001367581 ;   NM_001367582 ;   NM_001367774 ;   NM_001368133 ;   NM_001370182 ;   NM_001370183 ;   NM_001370184 ;   NM_001370185 ;   NM_001370186 ;   NM_003319 ;   NM_003496 ;   NM_003861 ;   NM_004227 ;   NM_004686 ;   NM_005185 ;   NM_005260 ;   NM_005288 ;   NM_005444 ;   NM_005445 ;   NM_005578 ;   NM_005863 ;   NM_006456 ;   NM_006873 ;   NM_013232 ;   NM_014829 ;   NM_014906 ;   NM_015603 ;   NM_015710 ;   NM_016075 ;   NM_016201 ;   NM_016210 ;   NM_017583 ;   NM_018383 ;   NM_019893 ;   NM_020447 ;   NM_020731 ;   NM_021115 ;   NM_022116 ;   NM_031889 ;   NM_031912 ;   NM_033208 ;   NM_033400 ;   NM_133378 ;   NM_133432 ;   NM_133437 ;   NM_138694 ;   NM_138799 ;   NM_153694 ;   NM_170724 ;   NM_176884 ;   NM_176885 ;   NM_181519 ;   NM_198279 ;   NM_198511 ;   NM_201286 ;   NR_002227 ;   NR_003057 ;   NR_003682 ;   NR_003713 ;   NR_024872 ;   NR_024873 ;   NR_048561 ;   NR_073040 ;   NR_073390 ;   NR_104261 ;   NR_105002 ;   NR_109833 ;   NR_110763 ;   NR_125341 ;   NR_135598 ;   NR_135599 ;   NR_135600 ;   NR_135603 ;   NR_135604 ;   NR_135605 ;   NR_135841 ;   NR_135842 ;   NR_135843 ;   NR_135844 ;   NR_135845 ;   NR_135846 ;   NR_135847 ;   NR_135848 ;   NR_135849 ;   NR_135850 ;   NR_135851 ;   NR_135852 ;   NR_135853 ;   NR_135854 ;   NR_135904 ;   NR_138467 ;   NR_138468 ;   NR_146089 ;   NR_147896 ;  

Predicted by TAPIR

NM_000291 ;   NM_000476 ;   NM_000620 ;   NM_000738 ;   NM_001004434 ;   NM_001024455 ;   NM_001025356 ;   NM_001037814 ;   NM_001039948 ;   NM_001042762 ;   NM_001047160 ;   NM_001079515 ;   NM_001080410 ;   NM_001080534 ;   NM_001098497 ;   NM_001098498 ;   NM_001130072 ;   NM_001130963 ;   NM_001142678 ;   NM_001142679 ;   NM_001170331 ;   NM_001171740 ;   NM_001171741 ;   NM_001174071 ;   NM_001174072 ;   NM_001184773 ;   NM_001184774 ;   NM_001184775 ;   NM_001184776 ;   NM_001184777 ;   NM_001191056 ;   NM_001195272 ;   NM_001198595 ;   NM_001204213 ;   NM_001204214 ;   NM_001204218 ;   NM_001204803 ;   NM_001218 ;   NM_001242412 ;   NM_001244580 ;   NM_001256850 ;   NM_001267550 ;   NM_001267556 ;   NM_001267558 ;   NM_001267559 ;   NM_001267798 ;   NM_001271634 ;   NM_001278683 ;   NM_001278685 ;   NM_001282168 ;   NM_001282169 ;   NM_001284206 ;   NM_001284207 ;   NM_001287492 ;   NM_001287493 ;   NM_001287494 ;   NM_001287495 ;   NM_001287496 ;   NM_001287801 ;   NM_001288824 ;   NM_001288825 ;   NM_001288826 ;   NM_001288827 ;   NM_001288828 ;   NM_001293642 ;   NM_001300860 ;   NM_001318121 ;   NM_001318122 ;   NM_001321920 ;   NM_001321922 ;   NM_001321923 ;   NM_001322056 ;   NM_001322057 ;   NM_001322058 ;   NM_001322059 ;   NM_001329919 ;   NM_001346558 ;   NM_001346559 ;   NM_001346560 ;   NM_001346561 ;   NM_001346562 ;   NM_001346563 ;   NM_001346564 ;   NM_001346565 ;   NM_001354208 ;   NM_001363943 ;   NM_001367774 ;   NM_001553 ;   NM_003193 ;   NM_003319 ;   NM_003496 ;   NM_003861 ;   NM_003967 ;   NM_004686 ;   NM_005020 ;   NM_005260 ;   NM_005444 ;   NM_005445 ;   NM_005863 ;   NM_006456 ;   NM_006873 ;   NM_013232 ;   NM_014829 ;   NM_014906 ;   NM_015257 ;   NM_015603 ;   NM_015710 ;   NM_016075 ;   NM_016128 ;   NM_016201 ;   NM_016210 ;   NM_017583 ;   NM_018383 ;   NM_020447 ;   NM_020731 ;   NM_021115 ;   NM_022116 ;   NM_032513 ;   NM_033208 ;   NM_033400 ;   NM_133378 ;   NM_133432 ;   NM_133437 ;   NM_133454 ;   NM_138694 ;   NM_139265 ;   NM_153029 ;   NM_170724 ;   NM_173808 ;   NM_176884 ;   NM_176885 ;   NM_178276 ;   NM_198279 ;   NM_198511 ;   NM_206925 ;   NR_003682 ;   NR_003713 ;   NR_047519 ;   NR_047521 ;   NR_047523 ;   NR_047524 ;   NR_047525 ;   NR_048561 ;   NR_073040 ;   NR_073390 ;   NR_104261 ;   NR_105002 ;   NR_109833 ;   NR_110763 ;   NR_125341 ;   NR_126060 ;   NR_126061 ;   NR_134315 ;   NR_135511 ;   NR_135572 ;   NR_135841 ;   NR_135842 ;   NR_135843 ;   NR_135844 ;   NR_135845 ;   NR_135846 ;   NR_135847 ;   NR_135848 ;   NR_135849 ;   NR_135850 ;   NR_135851 ;   NR_135852 ;   NR_135853 ;   NR_135854 ;   NR_138467 ;   NR_138468 ;   NR_146089 ;   NR_147896 ;   NR_159481 ;