1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR166
  5. Bbj-miR166a

Accession: B71130138

Entry

ID: Bbj-miR166a
Alias: F2.L000046.B3D*
Sequence: UCGGACCAGGCUUCAUUCCCC
Description: MIR166 putative
Species: 荜茄  Species latin name: -
TCM Name:
TCM Resource (Sample number): 荜茄(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Yes


Homologs

miRBase Homologs

aly-miR166a-3p; aly-miR166b-3p; aly-miR166c-3p; aly-miR166d-3p; aly-miR166e-3p; aly-miR166f-3p; aly-miR166g-3p; aly-miR166h-3p; aof-miR166d; aqc-miR166b; aqc-miR166e; ata-miR166a-3p; ata-miR166b-3p; ata-miR166d-3p; ata-miR166e-3p; ath-miR166a-3p; ath-miR166b-3p; ath-miR166c; ath-miR166d; ath-miR166e-3p; ath-miR166f; ath-miR166g; atr-miR166a; atr-miR166c; atr-miR166d; bdi-miR166a-3p; bdi-miR166b-3p; bdi-miR166c-3p; bdi-miR166d-3p; bdi-miR166i-3p; bna-miR166a; bna-miR166b; bna-miR166c; bna-miR166d; bna-miR166e; cme-miR166a; cme-miR166b; cme-miR166c; cme-miR166d; cme-miR166f; cme-miR166h; cpa-miR166a; cpa-miR166b; cpa-miR166c; csi-miR166e-3p; dpr-miR166b; eun-miR166-3p; fve-miR166a; fve-miR166b; fve-miR166c; fve-miR166d-3p; fve-miR166e; fve-miR166f; ghr-miR166b; gma-miR166a-3p; gma-miR166b; gma-miR166c-3p; gma-miR166d; gma-miR166e; gma-miR166f; gma-miR166g; gma-miR166i-3p; gma-miR166n; gma-miR166o; hpa-miR166a; hpe-miR166a; hvu-miR166a; hvu-miR166b; hvu-miR166c; lus-miR166a; lus-miR166c; lus-miR166d; lus-miR166g; lus-miR166h; lus-miR166j; mdm-miR166a; mdm-miR166b; mdm-miR166c; mdm-miR166d; mdm-miR166e; mdm-miR166f; mdm-miR166g; mdm-miR166h; mdm-miR166i; mdm-miR166j; mes-miR166a; mes-miR166b; mes-miR166c; mes-miR166d; mes-miR166e; mes-miR166f; mes-miR166g; mtr-miR166a; mtr-miR166e-3p; mtr-miR166g-3p; nta-miR166a; nta-miR166b; nta-miR166c; nta-miR166d; nta-miR166e; nta-miR166f; nta-miR166g; nta-miR166h; osa-miR166a-3p; osa-miR166b-3p; osa-miR166c-3p; osa-miR166d-3p; osa-miR166f; osa-miR166j-3p; pab-miR166f; pab-miR166g; pab-miR166h; pab-miR166i; ppe-miR166a; ppe-miR166b; ppe-miR166c; ppe-miR166d; ppe-miR166e; ppt-miR166a; ppt-miR166b; ppt-miR166c; ppt-miR166d; ppt-miR166e; ppt-miR166f; ppt-miR166g; ppt-miR166h; ppt-miR166i; pta-miR166a; pta-miR166b; ptc-miR166a; ptc-miR166b; ptc-miR166c; ptc-miR166d; ptc-miR166e; ptc-miR166f; ptc-miR166g; ptc-miR166h; ptc-miR166i; ptc-miR166j; ptc-miR166k; ptc-miR166l; ptc-miR166m; pvu-miR166a; rco-miR166a; rco-miR166b; rco-miR166c; rco-miR166d; rco-miR166e; sly-miR166a; sly-miR166b; smo-miR166a; smo-miR166b; smo-miR166c; ssl-miR166b; ssp-miR166; stu-miR166a-3p; stu-miR166c-3p; stu-miR166d-3p; tcc-miR166a; tcc-miR166d; vca-miR166a-3p; vca-miR166b-3p; vca-miR166c-3p; vvi-miR166c; vvi-miR166d; vvi-miR166e; vvi-miR166f; vvi-miR166g; vvi-miR166h; zma-miR166a-3p;

Bencao Homologs

Bbj-miR166a; Bjl-miR166a; Bsr-miR166a; Bswzz-miR166a; Btmz-miR166a; aan-miR166a; aar-miR166a; acn-miR166a; aco-miR166a; acr-miR166a; ade-miR166a; aeu-miR166a; agi-miR166; aha-miR166a; aju-miR166a; ala-miR166a; aof-miR166; aox-miR166a; apa-miR166a; apl-miR166a; asc-miR166a; ath-miR166a; att-miR166a; ave-miR166a; bca-miR166a; bch-miR166b; bci-miR166a; bhi-miR166a; bja-miR166a; bmj-miR166a; bpi-miR166a; cab-miR166a; car-miR166a; cas-miR166a; cau-miR166a; cba-miR166a; cci-miR166a; ccm-miR166a; cco-miR166aa; ccs-miR166aa; cde-miR166a; cfe-miR166a; cga-miR166a; cid-miR166a; cit-miR166a; cja-miR166a; cma-miR166; cmd-miR166a; cmi-miR166a; cmj-miR166a; cmn-miR166a; cmo-miR166a; cof-miR166aa; cor-miR166a; cpe-miR166a; cpn-miR166; cri-miR166a; cso-miR166a; csp-miR166a; cst-miR166; csu-miR166a; das-miR166a; dda-miR166; dlo-miR166a; dst-miR166a; dsu-miR166a; efo-miR166a; ehu-miR166a; eja-miR166a; epr-miR166aa; esn-miR166a; est-miR166a; fmu-miR166a; fsu-miR166a; fth-miR166; gbi-miR166aa; gel-miR166a; gja-miR166a; gma-miR166a; gmc-miR166a; gpe-miR166a; gsi-miR166a; hcr-miR166aa; hmu-miR166a; hoc-miR166a; hof-miR166a; hvu-miR166a; iba-miR166a; ija-miR166a; ili-miR166a; ini-miR166a; ksc-miR166a; lba-miR166a; lch-miR166a; lcr-miR166a; lfo-miR166a; lgr-miR166a; ljc-miR166a; lji-miR166a; ljn-miR166a; ljo-miR166a; ljp-miR166a; llc-miR166a; lln-miR166a; llu-miR166a; lpu-miR166aa; mal-miR166a; mca-miR166aa; mch-miR166a; mda-miR166a; mpu-miR166; nca-miR166a; nja-miR166a; nnu-miR166aa; nsc-miR166a; nte-miR166a; ofi-miR166a; pas-miR166b; pav-miR166a; pca-miR166a; pci-miR166a; pcl-miR166a; pcn-miR166a; pfr-miR166aa; pgi-miR166a; pmu-miR166a; poe-miR166a; por-miR166a; ppr-miR166; psu-miR166a; ptn-miR166a; pvl-miR166aa; rcd-miR166a; rch-miR166aa; rcr-miR166a; rja-miR166a; rte-miR166a; run-miR166a; sad-miR166a; sar-miR166a; sba-miR166a; sbc-miR166a; sca-miR166a; sch-miR166a; sdf-miR166a; sdi-miR166a; sgi-miR166a; sgl-miR166a; sjp-miR166a; sln-miR166; smi-miR166a; smn-miR166a; sor-miR166a; spo-miR166a; ssa-miR166a; sse-miR166a; ssu-miR166a; sto-miR166a; tch-miR166a; tci-miR166a; tfa-miR166a; tja-miR166a; tmo-miR166a; tru-miR166a; twi-miR166a; vof-miR166a; vph-miR166a; vtr-miR166d; vum-miR166a; zmu-miR166a;

Rfam Alignments

>> mir-166  mir-166 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   5.9e-05   24.1   0.0  cm      101      121 ~~           1          21 + ~~ 1.00 5'&3' 0.62
                                                                ???  ??????  ????????      NC
                                                         ~~~~~~~>>>-->>>>>>-->>>>>>>>~~~~~ CS
                                             mir-166   1 <[100]*UCGGACCAGGCUUCAUUCCcC*[5]> 126
                                                                UCGGACCAGGCUUCAUUCCCC
                                         zmu-miR166a   1 <[  0]*UCGGACCAGGCUUCAUUCCCC*[0]> 21
                                                         .......*********************..... PP

Targets

Predicted by TargetFinder

Predicted by TAPIR