The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. lin
  5. sor-lin-4p

Accession: B63109742

Entry

ID: sor-lin-4p
Alias: F18150.N000105.A11
Sequence: ACCCUGAGACCCUAACUUGUGAA
Description: lin-4 microRNA precursor predicted,partially
Species: 豨莶  Species latin name: Sigesbeckia orientalis
TCM Name: Xixiancao(豨莶草)  
TCM Resource (Sample number): 豨莶草(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0053   19.1   0.0  cm        8       29 .~           2          23 + .~ 1.00    3' 0.50
                         ??? ???? ??? ????????        NC
                         <<<-<<<<-<<<-<<<<<<<<_~~~~~~ CS
                lin-4  8 CCCUGAGACCccAAcuuGUGAg*[35]> 64
                         CCCUGAGACCC AACUUGUGA
           sor-lin-4p  2 CCCUGAGACCCUAACUUGUGAA*[ 0]> 23
                         **********************...... PP

Targets

Predicted by TargetFinder

NM_013321 ;  

Predicted by TAPIR

NM_013321 ;