The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR184
  5. pgi-miR184

Accession: B53311725

Entry

ID: pgi-miR184
Alias: F3064.M000113.A25
Sequence: UGGACGGAGAACUGAUAAGGGC
Description: microRNA mir-184 predicted
Species: 人参  Species latin name: Panax ginseng
TCM Name: Renshen(人参)   Renshenye(人参叶)   Hongshen(红参)  
TCM Resource (Sample number): 人参叶(1) 红参(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR184c; Bsr-miR184b; Bswzz-miR184a; aan-miR184; acr-miR184b; act-miR184b; aha-miR184; apl-miR184; bca-miR184c; bpi-miR184; cci-miR184; cco-miR184; ccs-miR184b; cfe-miR184a; cmd-miR184c; cof-miR184c; cor-miR184b; csp-miR184b; csu-miR184; fmu-miR184b; fsu-miR184; gbi-miR184; ija-miR184; kga-miR184; lfo-miR184; ljc-miR184c; lji-miR184a; llu-miR184; pas-miR184a; pgi-miR184; poe-miR184c; rcd-miR184; rch-miR184; rcr-miR184; sar-miR184; sba-miR184b; sch-miR184; sjp-miR184; spo-miR184a; tch-miR184; tci-miR184; tfa-miR184b; tmo-miR184b; twi-miR184; vtr-miR184; zof-miR184c;

Rfam Alignments

>> mir-184  microRNA mir-184
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0012   21.7   0.0  cm       53       74 ~~           1          22 + ~~ 1.00 5'&3' 0.55
                                                            ??? ??????? ?????????        NC
                                                      ~~~~~~>>>->>>>>>>->>>>>>>>>:~~~~~~ CS
                                           mir-184  1 <[52]*uGGACgGAgAACUGAUAAGGgc*[10]> 84
                                                            UGGACGGAGAACUGAUAAGGGC
                                       zof-miR184c  1 <[ 0]*UGGACGGAGAACUGAUAAGGGC*[ 0]> 22
                                                      ......**********************...... PP

Targets

Predicted by TargetFinder


Predicted by TAPIR