The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR126
  5. pgi-miR126

Accession: B53231807

Entry

ID: pgi-miR126
Alias: F818.L000004.A25
Sequence: UCGUACCGUGAGUAAUAAUGC
Description: microRNA mir-126 predicted
Species: 人参  Species latin name: Panax ginseng
TCM Name: Renshen(人参)   Renshenye(人参叶)   Hongshen(红参)  
TCM Resource (Sample number): 人参叶(1) 红参(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR126b; Bswzz-miR126a; acr-miR126a; asc-miR126b; bca-miR126a; bch-miR126a; bhi-miR126a; cas-miR126a; cba-miR126a; cci-miR126a; cfe-miR126a; cit-miR126b; cma-miR126a; cmd-miR126b; cof-miR126a; cri-miR126a; csu-miR126a; ehu-miR126a; epr-miR126a; esn-miR126a; fmu-miR126a; fsu-miR126a; gel-miR126a; hcr-miR126b; kga-miR126a; lba-miR126a; lji-miR126a; ljo-miR126a; ljp-miR126a; llu-miR126a; mal-miR126a; nnu-miR126a; nte-miR126a; pcn-miR126; pfr-miR126a; pgi-miR126; poe-miR126b; ppr-miR126a; psu-miR126a; pvl-miR126a; run-miR126a; sar-miR126a; sbc-miR126a; sca-miR126a; sch-miR126a; sdf-miR126a; sdi-miR126a; sgi-miR126a; sln-miR126a; sor-miR126b; tch-miR126a; tki-miR126a; vph-miR126a; zof-miR126a;

Rfam Alignments

>> mir-126  microRNA mir-126
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0079   18.7   0.0  cm       46       66 ~~           1          21 + ~~ 1.00 5'&3' 0.43
                                                               ??????? ???????????       NC
                                                        ~~~~~~->>>>>>>->>>>>>>>>>>:~~~~~ CS
                                             mir-126  1 <[45]*UCGUACCgUgAGUAAUAAUGC*[7]> 73
                                                              UCGUACCGUGAGUAAUAAUGC
                                         zof-miR126a  1 <[ 0]*UCGUACCGUGAGUAAUAAUGC*[0]> 21
                                                        ......*********************..... PP

Targets

Predicted by TargetFinder

NR_107029 ;  

Predicted by TAPIR

NR_107029 ;