The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR171
  5. lpu-miR171b

Accession: B43948968

Entry

ID: lpu-miR171b
Alias: F5912.K000023.A29*
Sequence: UGAUUGAGCCGUGCCAAUAU
Description: MIR171 putative
Species: 扁豆  Species latin name: Lablab purpureus
TCM Name: Baibiandou(白扁豆)  
TCM Resource (Sample number): 白扁豆(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

htu-miR171a;

Bencao Homologs

None

Rfam Alignments

>> MIR171_1  microRNA MIR171_1
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0076   20.6   0.0  cm       69       88 ~~           1          20 + ~~ 1.00 5'&3' 0.45
                               ?? ??????  ????????       NC
                        ~~~~~~_>>->>>>>>-->>>>>>>>~~~~~~ CS
            MIR171_1  1 <[68]*UGAUUGAGCCGUgCCAAuAU*[13]> 101
                              UGAUUGAGCCGUGCCAAUAU
         lpu-miR171b  1 <[ 0]*UGAUUGAGCCGUGCCAAUAU*[ 0]> 20
                        ......********************...... PP

Targets

Predicted by TargetFinder

NM_000844 ;   NM_181874 ;  

Predicted by TAPIR