The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR164
  5. gsi-miR164

Accession: B35086806

Entry

ID: gsi-miR164
Alias: F6385.M000271.A25
Sequence: UCAUGUGCCCGUCUUCCCCAUC
Description: microRNA MIR164 predicted
Species: 皂荚  Species latin name: Gleditsia sinensis
TCM Name: Dazaojiao(大皂角)   Zaojiaoci(皂角刺)   Zhuyazao(猪牙皂)  
TCM Resource (Sample number): 皂角刺(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> MIR164  microRNA MIR164
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0061   16.6   0.0  cm       80      101 ~~           1          22 + ~~ 1.00 5'&3' 0.59
                                                                ??????????  ???????? ?      NC
                                                          ~~~~~~>>>>>>>>>>-->>>>>>>>->~~~~~ CS
                                               MIR164   1 <[79]*gCAcGUGCcCuuCUUCuCCAuC*[8]> 109
                                                                 CA GUGCCC UCUUC CCAUC
                                           gsi-miR164   1 <[ 0]*UCAUGUGCCCGUCUUCCCCAUC*[0]> 22
                                                          ......**********************..... PP

Targets

Predicted by TargetFinder

NM_001104595 ;   NM_001349913 ;   NM_001349914 ;   NM_001349915 ;   NM_001349916 ;   NM_017911 ;   NR_146323 ;  

Predicted by TAPIR

NM_001104595 ;   NM_001349913 ;   NM_001349914 ;   NM_001349915 ;   NM_001349916 ;   NM_017911 ;   NR_146323 ;