The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR164
  5. csu-miR164d

Accession: B26325135

Entry

ID: csu-miR164d
Alias: F57750.J000004.A25
Sequence: UGGAGAAGCAGGGCACGCG
Description: microRNA MIR164 predicted
Species: 毛叶榄  Species latin name: Canarium subulatum
TCM Name: Qingguo(青果)  
TCM Resource (Sample number): 青果(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

None

Rfam Alignments

>> MIR164  microRNA MIR164
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0054   16.5   0.0  cm       11       29 ~~           1          19 + ~~ 1.00 5'&3' 0.68
                                                                 ????????  ?????????       NC
                                                           ~~~~~~<<<<<<<<--<<<<<<<<<~~~~~~ CS
                                                 MIR164  1 <[10]*UGGaGAAGCAGgGCACgUG*[80]> 109
                                                                 UGGAGAAGCAGGGCACG G
                                            csu-miR164d  1 <[ 0]*UGGAGAAGCAGGGCACGCG*[ 0]> 19
                                                           ......*******************...... PP

Targets

Predicted by TargetFinder

NM_000168 ;   NM_000599 ;   NM_000603 ;   NM_001004360 ;   NM_001008396 ;   NM_001012393 ;   NM_001017916 ;   NM_001017917 ;   NM_001024736 ;   NM_001033521 ;   NM_001039583 ;   NM_001039584 ;   NM_001048205 ;   NM_001077503 ;   NM_001077504 ;   NM_001077505 ;   NM_001077506 ;   NM_001085382 ;   NM_001089 ;   NM_001102450 ;   NM_001109997 ;   NM_001127244 ;   NM_001127245 ;   NM_001128631 ;   NM_001135674 ;   NM_001135675 ;   NM_001136537 ;   NM_001137673 ;   NM_001142685 ;   NM_001145064 ;   NM_001145536 ;   NM_001160102 ;   NM_001160147 ;   NM_001160148 ;   NM_001166425 ;   NM_001172655 ;   NM_001184785 ;   NM_001184786 ;   NM_001184787 ;   NM_001184788 ;   NM_001184789 ;   NM_001184790 ;   NM_001184791 ;   NM_001191323 ;   NM_001193397 ;   NM_001204848 ;   NM_001204856 ;   NM_001206984 ;   NM_001244937 ;   NM_001256324 ;   NM_001256325 ;   NM_001256326 ;   NM_001256327 ;   NM_001256328 ;   NM_001256329 ;   NM_001256330 ;   NM_001256331 ;   NM_001256332 ;   NM_001256333 ;   NM_001256334 ;   NM_001256359 ;   NM_001256360 ;   NM_001256361 ;   NM_001257328 ;   NM_001257329 ;   NM_001257330 ;   NM_001257331 ;   NM_001261835 ;   NM_001271832 ;   NM_001277198 ;   NM_001277199 ;   NM_001277200 ;   NM_001278718 ;   NM_001278919 ;   NM_001278920 ;   NM_001282161 ;   NM_001282617 ;   NM_001282618 ;   NM_001282619 ;   NM_001282620 ;   NM_001286057 ;   NM_001288654 ;   NM_001288655 ;   NM_001288800 ;   NM_001291088 ;   NM_001300804 ;   NM_001300805 ;   NM_001300806 ;   NM_001302705 ;   NM_001303118 ;   NM_001303119 ;   NM_001318913 ;   NM_001319103 ;   NM_001319104 ;   NM_001319105 ;   NM_001319106 ;   NM_001321326 ;   NM_001321906 ;   NM_001321909 ;   NM_001322033 ;   NM_001324112 ;   NM_001324338 ;   NM_001324375 ;   NM_001329628 ;   NM_001329629 ;   NM_001329938 ;   NM_001329939 ;   NM_001330064 ;   NM_001330421 ;   NM_001354844 ;   NM_001354845 ;   NM_001363186 ;   NM_001365790 ;   NM_001365896 ;   NM_001368719 ;   NM_001369564 ;   NM_001372 ;   NM_001567 ;   NM_001756 ;   NM_001915 ;   NM_002070 ;   NM_002447 ;   NM_002545 ;   NM_003239 ;   NM_003336 ;   NM_003591 ;   NM_004041 ;   NM_004313 ;   NM_004516 ;   NM_004528 ;   NM_004662 ;   NM_004758 ;   NM_005132 ;   NM_005334 ;   NM_005586 ;   NM_006151 ;   NM_006160 ;   NM_006790 ;   NM_007086 ;   NM_012407 ;   NM_013348 ;   NM_013372 ;   NM_014184 ;   NM_014715 ;   NM_014825 ;   NM_015210 ;   NM_018260 ;   NM_018463 ;   NM_018896 ;   NM_019594 ;   NM_019619 ;   NM_020184 ;   NM_020251 ;   NM_020719 ;   NM_020799 ;   NM_021131 ;   NM_021257 ;   NM_022492 ;   NM_024041 ;   NM_024418 ;   NM_024819 ;   NM_025240 ;   NM_030637 ;   NM_030779 ;   NM_031951 ;   NM_031966 ;   NM_032951 ;   NM_032952 ;   NM_032953 ;   NM_032954 ;   NM_033071 ;   NM_033345 ;   NM_133637 ;   NM_145236 ;   NM_145314 ;   NM_152597 ;   NM_153464 ;   NM_170685 ;   NM_173092 ;   NM_174945 ;   NM_178000 ;   NM_178001 ;   NM_178003 ;   NM_181762 ;   NM_182961 ;   NM_198376 ;   NM_198377 ;   NM_198378 ;   NM_198379 ;   NM_198380 ;   NM_198382 ;   NM_198383 ;   NM_198384 ;   NM_198385 ;   NM_198386 ;   NM_198387 ;   NM_198388 ;   NM_198396 ;   NM_199004 ;   NM_199126 ;   NR_003929 ;   NR_027647 ;   NR_027749 ;   NR_033415 ;   NR_037193 ;   NR_037937 ;   NR_046054 ;   NR_046055 ;   NR_046056 ;   NR_046057 ;   NR_046058 ;   NR_047516 ;   NR_102347 ;   NR_104148 ;   NR_104149 ;   NR_110017 ;   NR_130744 ;   NR_134251 ;   NR_134541 ;   NR_134919 ;   NR_144354 ;   NR_144355 ;   NR_144356 ;   NR_144357 ;   NR_144937 ;   NR_146711 ;   NR_147202 ;   NR_148918 ;   NR_148919 ;   NR_148936 ;  

Predicted by TAPIR

NM_001008396 ;   NM_001012393 ;   NM_001039583 ;   NM_001039584 ;   NM_001048205 ;   NM_001077503 ;   NM_001077504 ;   NM_001077505 ;   NM_001077506 ;   NM_001080437 ;   NM_001083590 ;   NM_001085382 ;   NM_001102450 ;   NM_001109997 ;   NM_001114 ;   NM_001127244 ;   NM_001127245 ;   NM_001135674 ;   NM_001135675 ;   NM_001142294 ;   NM_001142295 ;   NM_001142296 ;   NM_001142326 ;   NM_001142327 ;   NM_001142685 ;   NM_001145064 ;   NM_001145114 ;   NM_001145536 ;   NM_001159387 ;   NM_001160102 ;   NM_001164326 ;   NM_001166049 ;   NM_001184785 ;   NM_001184786 ;   NM_001184787 ;   NM_001184788 ;   NM_001184789 ;   NM_001184790 ;   NM_001184791 ;   NM_001185054 ;   NM_001193570 ;   NM_001193571 ;   NM_001193572 ;   NM_001198961 ;   NM_001198962 ;   NM_001206984 ;   NM_001243689 ;   NM_001244937 ;   NM_001256324 ;   NM_001256325 ;   NM_001256326 ;   NM_001256327 ;   NM_001256328 ;   NM_001256329 ;   NM_001256330 ;   NM_001256331 ;   NM_001256332 ;   NM_001256333 ;   NM_001256334 ;   NM_001256359 ;   NM_001256360 ;   NM_001256361 ;   NM_001257328 ;   NM_001257329 ;   NM_001257330 ;   NM_001257331 ;   NM_001271844 ;   NM_001271845 ;   NM_001272037 ;   NM_001278718 ;   NM_001278919 ;   NM_001278920 ;   NM_001282203 ;   NM_001282204 ;   NM_001282535 ;   NM_001284337 ;   NM_001286057 ;   NM_001288800 ;   NM_001291088 ;   NM_001291866 ;   NM_001300765 ;   NM_001300804 ;   NM_001300805 ;   NM_001300806 ;   NM_001300961 ;   NM_001300962 ;   NM_001300966 ;   NM_001302705 ;   NM_001303118 ;   NM_001303119 ;   NM_001318913 ;   NM_001319103 ;   NM_001319104 ;   NM_001319105 ;   NM_001319106 ;   NM_001319958 ;   NM_001324112 ;   NM_001324338 ;   NM_001330064 ;   NM_001348249 ;   NM_001351302 ;   NM_001351312 ;   NM_001351313 ;   NM_001351315 ;   NM_001351317 ;   NM_001351319 ;   NM_001351320 ;   NM_001351321 ;   NM_001351322 ;   NM_001351324 ;   NM_001351325 ;   NM_001351326 ;   NM_001351327 ;   NM_001351328 ;   NM_001351330 ;   NM_001351332 ;   NM_001351333 ;   NM_001351334 ;   NM_001351335 ;   NM_001351336 ;   NM_001354844 ;   NM_001354845 ;   NM_001363186 ;   NM_001365790 ;   NM_001367835 ;   NM_001369408 ;   NM_001369409 ;   NM_001369410 ;   NM_001369411 ;   NM_001369412 ;   NM_001369413 ;   NM_001369414 ;   NM_001369415 ;   NM_001369416 ;   NM_001369417 ;   NM_001369418 ;   NM_001369419 ;   NM_001369564 ;   NM_001383 ;   NM_001567 ;   NM_001617 ;   NM_001983 ;   NM_002447 ;   NM_002545 ;   NM_003013 ;   NM_004041 ;   NM_004078 ;   NM_004313 ;   NM_004481 ;   NM_004820 ;   NM_005132 ;   NM_005334 ;   NM_005586 ;   NM_006151 ;   NM_006696 ;   NM_006807 ;   NM_007086 ;   NM_012407 ;   NM_013364 ;   NM_014715 ;   NM_014825 ;   NM_014909 ;   NM_015082 ;   NM_015087 ;   NM_015179 ;   NM_015416 ;   NM_017488 ;   NM_017727 ;   NM_018228 ;   NM_018281 ;   NM_018463 ;   NM_018896 ;   NM_019020 ;   NM_019594 ;   NM_019619 ;   NM_020251 ;   NM_020719 ;   NM_021145 ;   NM_021257 ;   NM_030779 ;   NM_030923 ;   NM_031951 ;   NM_031966 ;   NM_033345 ;   NM_139199 ;   NM_144991 ;   NM_145236 ;   NM_145314 ;   NM_152597 ;   NM_152601 ;   NM_153446 ;   NM_170685 ;   NM_173092 ;   NM_198376 ;   NM_198377 ;   NM_198378 ;   NM_198379 ;   NM_198380 ;   NM_198382 ;   NM_198383 ;   NM_198384 ;   NM_198385 ;   NM_198386 ;   NM_198387 ;   NM_198388 ;   NM_198396 ;   NM_198545 ;   NM_199004 ;   NM_199126 ;   NM_202001 ;   NR_003948 ;   NR_024075 ;   NR_024549 ;   NR_024550 ;   NR_027647 ;   NR_030615 ;   NR_034168 ;   NR_037193 ;   NR_045019 ;   NR_045020 ;   NR_046054 ;   NR_046055 ;   NR_046056 ;   NR_046057 ;   NR_046058 ;   NR_047516 ;   NR_049777 ;   NR_104148 ;   NR_104149 ;   NR_104292 ;   NR_110017 ;   NR_125390 ;   NR_130744 ;   NR_134251 ;   NR_134919 ;   NR_145427 ;   NR_147098 ;   NR_147099 ;   NR_147100 ;   NR_147101 ;   NR_147102 ;   NR_147103 ;   NR_147104 ;   NR_147105 ;   NR_147106 ;   NR_147107 ;   NR_147109 ;   NR_147110 ;   NR_147111 ;   NR_147112 ;   NR_147113 ;   NR_147114 ;   NR_147115 ;   NR_147116 ;   NR_147117 ;   NR_147118 ;   NR_147119 ;   NR_147120 ;   NR_147202 ;   NR_148936 ;