The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR164
  5. bmj-miR164

Accession: B11957595

Entry

ID: bmj-miR164
Alias: F1219.L000002.A3D*
Sequence: UGGAGAAGCAGGGCACGUGCU
Description: MIR164 putative
Species: 拳参  Species latin name: Bistorta major
TCM Name: Quanshen(拳参)  
TCM Resource (Sample number): 拳参(1)
Predicted by Mirnovo: -
Evidence support: Mirbase|infernal
Experimental status: Not yet

Homologs

miRBase Homologs

ata-miR164a-5p; bdi-miR164c-5p; cme-miR164a; osa-miR164d; sbi-miR164b; zma-miR164f-5p;

Bencao Homologs

None

Rfam Alignments

>> MIR164  microRNA MIR164
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00044   20.2   0.0  cm       11       31 ~~           1          21 + ~~ 1.00 5'&3' 0.62
                                                                ????????  ???????????       NC
                                                          ~~~~~~<<<<<<<<--<<<<<<<<<<<~~~~~~ CS
                                                MIR164  1 <[10]*UGGaGAAGCAGgGCACgUGca*[78]> 109
                                                                UGGAGAAGCAGGGCACGUGC
                                            bmj-miR164  1 <[ 0]*UGGAGAAGCAGGGCACGUGCU*[ 0]> 21
                                                          ......*********************...... PP

Targets

Predicted by TargetFinder

NM_000168 ;   NM_001145044 ;   NM_001329938 ;   NM_001329939 ;   NM_003239 ;   NM_006454 ;   NM_007045 ;   NM_013272 ;   NM_022492 ;   NM_194429 ;   NM_203407 ;   NR_027107 ;   NR_027749 ;   NR_125905 ;  

Predicted by TAPIR

NM_000033 ;   NM_000168 ;   NM_001080437 ;   NM_001145044 ;   NM_001164326 ;   NM_001172655 ;   NM_001204897 ;   NM_001204898 ;   NM_001206984 ;   NM_001289010 ;   NM_001300961 ;   NM_001300962 ;   NM_001300966 ;   NM_001302705 ;   NM_001324073 ;   NM_001324076 ;   NM_001329938 ;   NM_001329939 ;   NM_001351862 ;   NM_003239 ;   NM_006454 ;   NM_006696 ;   NM_007045 ;   NM_013272 ;   NM_014825 ;   NM_018260 ;   NM_020379 ;   NM_020799 ;   NM_022492 ;   NM_138461 ;   NM_139199 ;   NM_173791 ;   NM_194429 ;   NM_203407 ;   NR_003929 ;   NR_027107 ;   NR_027749 ;   NR_037950 ;   NR_111982 ;   NR_125366 ;   NR_125905 ;   NR_144354 ;   NR_144355 ;   NR_144356 ;   NR_144357 ;   NR_148936 ;