The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR103
  5. bhi-miR103f

Accession: B11237946

Entry

ID: bhi-miR103f
Alias: F16365.O000076.A11
Sequence: AGCAGCAUUGUACAGGGCUAUGUU
Description: mir-103/107 microRNA precursor predicted,partially
Species: 冬瓜  Species latin name: Benincasa hispida
TCM Name: Dongguapi(冬瓜皮)  
TCM Resource (Sample number): 冬瓜皮(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR103e; bca-miR103c; bch-miR103e; bhi-miR103f; cit-miR103k; hcr-miR103g; poe-miR103j; sor-miR103j;

Rfam Alignments

>> mir-103  mir-103/107 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0037   19.8   0.0  cm       48       69 ~.           1          22 + ~. 1.00    5' 0.50
                                ???????????    ??   ? NC
                         ~~~~~~_>>>>>>>>>>>---->>---> CS
              mir-103 10 <[38]*AGCAgCAuUGUACAGGGCUAUg 69
                               AGCAGCAUUGUACAGGGCUAUG
          sor-miR103j  1 <[ 0]*AGCAGCAUUGUACAGGGCUAUG 22
                         ......********************** PP

Targets

Predicted by TargetFinder

NM_001144960 ;   NM_001315505 ;   NM_001315506 ;   NM_002180 ;  

Predicted by TAPIR

NM_001144960 ;   NM_001315505 ;   NM_001315506 ;   NR_031721 ;   NR_031722 ;