1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. lin
  5. bhi-lin-4a

Accession: B11113840

Entry

ID: bhi-lin-4a
Alias: F3081.L000011.A25
Sequence: UCCCUGAGACCCUAACUUGUG
Description: lin-4 microRNA precursor predicted,partially
Species: 冬瓜  Species latin name: Benincasa hispida
TCM Name: Dongguapi(冬瓜皮)  
TCM Resource (Sample number): 冬瓜皮(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet


Rfam Alignments

>> lin-4  lin-4 microRNA precursor
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0028   20.0   0.0  cm        7       27 ~~           1          21 + ~~ 1.00 5'&3' 0.52
                                                              ??? ???? ??? ???????       NC
                                                        ~~~~~-<<<-<<<<-<<<-<<<<<<<~~~~~~ CS
                                               lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUG*[44]> 71
                                                             UCCCUGAGACCC AACUUGUG
                                          zof-lin-4b  1 <[0]*UCCCUGAGACCCUAACUUGUG*[ 0]> 21
                                                        .....*********************...... PP