Entry

ID: bhi-miR7a
Alias: F1939.O001700.A25
Sequence: UGGAAGACUAGUGAUUUUGUUGUU
Description: mir-7 microRNA precursor predicted,partially
Species: 冬瓜 Species latin name: Benincasa hispida
TCM Name: Dongguapi(冬瓜皮)
TCM Resource (Sample number): 冬瓜皮(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR7a; Bswzz-miR7; acr-miR7a; bca-miR7a; bch-miR7; bci-miR7; bhi-miR7a; bpi-miR7; cas-miR7a; cba-miR7a; cci-miR7; ccs-miR7; cfe-miR7a; cit-miR7a; cmd-miR7a; cof-miR7a; cso-miR7a; csp-miR7a; csu-miR7a; ehu-miR7; fmu-miR7a; fsu-miR7a; gel-miR7a; hcr-miR7a; hvu-miR7; kga-miR7; lba-miR7a; lgr-miR7; ljc-miR7a; lji-miR7a; ljn-miR7a; ljo-miR7a; llu-miR7a; mpu-miR7a; nja-miR7; nsc-miR7a; ofi-miR7a; pch-miR7; pfr-miR7a; pgi-miR7; poe-miR7a; ppr-miR7a; pvl-miR7a; rch-miR7; run-miR7; sar-miR7a; sba-miR7a; sca-miR7; sch-miR7a; sdi-miR7a; sgi-miR7a; sor-miR7a; spo-miR7; tch-miR7a; tfa-miR7a; tki-miR7a; vph-miR7; zof-miR7a;

Rfam Alignments

>> mir-7  mir-7 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !   0.00022   25.1   0.0  cm       15       38 ~~           1          24 + ~~ 1.00 5'&3' 0.33
                                                                ??       ????? ????????       NC
                                                         ~~~~~~-<<-------<<<<<-<<<<<<<<~~~~~~ CS
                                                mir-7  1 <[14]*UGGAAGACUAGuGAuUUUgUUGUu*[50]> 88
                                                               UGGAAGACUAGUGAUUUUGUUGUU
                                            zof-miR7a  1 <[ 0]*UGGAAGACUAGUGAUUUUGUUGUU*[ 0]> 24
                                                         ......************************...... PP

Targets

Predicted by TargetFinder

NM_001048166 ; NM_001282936 ; NM_001282937 ; NM_001282938 ; NM_001282939 ; NM_003035 ; NR_039867 ;

Predicted by TAPIR