The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR101
  5. bch-miR101c

Accession: B10403092

Entry

ID: bch-miR101c
Alias: F27922.M000240.A25*
Sequence: UACAGUACUGUGAUAACUGAAG
Description: mir-101 microRNA precursor family predicted,partially
Species: 北柴胡  Species latin name: Bupleurum Chinense
TCM Name:
TCM Resource (Sample number): 北柴胡(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR101b; acr-miR101b; asc-miR101c; bca-miR101b; bch-miR101c; bhi-miR101b; bpi-miR101c; cci-miR101; cfe-miR101c; cit-miR101d; cmd-miR101c; cmi-miR101b; cmj-miR101; fsu-miR101c; gpe-miR101; hcr-miR101c; lgr-miR101c; ljn-miR101c; ljo-miR101b; ljp-miR101; mal-miR101; mpu-miR101c; pfr-miR101b; poe-miR101c; ppr-miR101b; pvl-miR101c; sar-miR101; sba-miR101; sbc-miR101; sdf-miR101; sgi-miR101b; smi-miR101; sor-miR101c; tch-miR101; tki-miR101b; tmo-miR101; vph-miR101c; zof-miR101b;

Rfam Alignments

>> mir-101  mir-101 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0093   18.4   0.0  cm       47       68 ~~           1          22 + ~~ 1.00 5'&3' 0.36
                                                               ?????????????????? ?      NC
                                                       ~~~~~~__>>>>>>>>>>>>>>>>>>->~~~~~ CS
                                            mir-101  1 <[46]*UACaGuACugUGAUAACuGAAg*[7]> 75
                                                             UACAGUACUGUGAUAACUGAAG
                                        zof-miR101b  1 <[ 0]*UACAGUACUGUGAUAACUGAAG*[0]> 22
                                                       ......**********************..... PP

Targets

Predicted by TargetFinder

NM_001242314 ;   NM_001242317 ;   NM_004721 ;  

Predicted by TAPIR

NM_001242314 ;   NM_001242317 ;   NM_001286238 ;   NM_001286239 ;   NM_004721 ;   NM_019073 ;