The Bencao (Herbal) Database（本草数据库）

  1. OmicsAtlas
  2. TranscriptomeAtlas
  3. miRNA Atlas
  4. miR101
  5. bch-miR101b

Accession: B10403091

Entry

ID: bch-miR101b
Alias: F27922.M000239.A25*
Sequence: GUACAGUACUGUGAUAACUGAA
Description: mir-101 microRNA precursor family predicted,partially
Species: 北柴胡  Species latin name: Bupleurum Chinense
TCM Name:
TCM Resource (Sample number): 北柴胡(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-miR101a; asc-miR101b; bca-miR101a; bch-miR101b; bhi-miR101a; bpi-miR101b; cfe-miR101b; cit-miR101c; cmd-miR101b; cmi-miR101a; fsu-miR101b; hcr-miR101b; lgr-miR101b; ljn-miR101b; ljo-miR101a; mpu-miR101b; pfr-miR101a; poe-miR101b; ppr-miR101a; pvl-miR101b; sgi-miR101a; sor-miR101b; tki-miR101a; vph-miR101b; zof-miR101a;

Rfam Alignments

>> mir-101  mir-101 microRNA precursor family
 rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
 ----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0074   18.7   0.0  cm       46       67 ~~           1          22 + ~~ 1.00 5'&3' 0.36
                                                                  ??????????????????       NC
                                                         ~~~~~~___>>>>>>>>>>>>>>>>>>-~~~~~ CS
                                              mir-101  1 <[45]*GUACaGuACugUGAUAACuGAA*[8]> 75
                                                               GUACAGUACUGUGAUAACUGAA
                                          zof-miR101a  1 <[ 0]*GUACAGUACUGUGAUAACUGAA*[0]> 22
                                                         ......**********************..... PP

Targets

Predicted by TargetFinder

NM_001003652 ;   NM_001135937 ;   NM_005901 ;   NR_034007 ;  

Predicted by TAPIR

NR_034007 ;