Accession: B16636786

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: cit-lin-4s
Alias: F44011.L000035.A11*
Sequence: CCCUGAGACCCUAACUUGUGA
Description: lin-4 microRNA precursor predicted,partially
Species: 菊苣 Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

Bjl-lin-4f; cit-lin-4s; cmd-lin-4i; hcr-lin-4h; poe-lin-4m; sor-lin-4t; tki-lin-4f;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0035   19.6   0.0  cm        8       28 ~~           1          21 + ~~ 1.00 5'&3' 0.52
                  ??? ???? ??? ????????       NC
             ~~~~~<<<-<<<<-<<<-<<<<<<<<~~~~~~ CS
    lin-4  1 <[7]*CCCUGAGACCccAAcuuGUGA*[43]> 71
                  CCCUGAGACCC AACUUGUGA
tki-lin-4f  1 <[0]*CCCUGAGACCCUAACUUGUGA*[ 0]> 21
             .....*********************...... PP

Targets

Predicted by TargetFinder

NM_001005851 ;

Predicted by TAPIR

NM_001005851 ; NM_013321 ; NR_033962 ;