Accession: B16607266

Entry
Homologs
Rfam Alignments
Targets

Entry

ID: cit-lin-4o
Alias: F18150.N000111.A11
Sequence: UCCCUGAGACCCUAACUCGUGAA
Description: lin-4 microRNA precursor predicted,partially
Species: 菊苣 Species latin name: Cichorium intybus
TCM Name: Juju(菊苣)
TCM Resource (Sample number): 菊苣(1)
Predicted by Mirnovo: -
Evidence support: Infernal
Experimental status: Not yet

Homologs

miRBase Homologs

None

Bencao Homologs

cit-lin-4o; fsu-lin-4f;

Rfam Alignments

>> lin-4  lin-4 microRNA precursor
rank     E-value  score  bias mdl mdl from   mdl to       seq from      seq to       acc trunc   gc
----   --------- ------ ----- --- -------- --------    ----------- -----------      ---- ----- ----
  (1) !    0.0049   19.3   0.0  cm        7       29 ~~           1          23 + ~~ 1.00 5'&3' 0.52
                               ??? ???? ??? ????????        NC
                         ~~~~~-<<<-<<<<-<<<-<<<<<<<<_~~~~~~ CS
                lin-4  1 <[6]*UCCCUGAGACCccAAcuuGUGAg*[42]> 71
                              UCCCUGAGACCC AACU GUGA
           fsu-lin-4f  1 <[0]*UCCCUGAGACCCUAACUCGUGAA*[ 0]> 23
                         .....***********************...... PP

Targets

Predicted by TargetFinder

NM_001257135 ; NM_002309 ; NM_013321 ;

Predicted by TAPIR

NR_033962 ;